Protein–RNA interactions for Protein: O15344

MID1, E3 ubiquitin-protein ligase Midline-1, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MID1O15344 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.73■□□□□ 0.11
MID1O15344 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
MID1O15344 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
MID1O15344 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.73■□□□□ 0.11
MID1O15344 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.73■□□□□ 0.11
MID1O15344 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
MID1O15344 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
MID1O15344 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
MID1O15344 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
MID1O15344 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.73■□□□□ 0.11
MID1O15344 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
MID1O15344 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC15.73■□□□□ 0.11
MID1O15344 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC15.73■□□□□ 0.11
MID1O15344 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
MID1O15344 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC15.73■□□□□ 0.11
MID1O15344 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
MID1O15344 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC15.73■□□□□ 0.11
MID1O15344 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC15.73■□□□□ 0.11
MID1O15344 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.73■□□□□ 0.11
MID1O15344 PTP4A1P2-201ENST00000546033 454 ntBASIC15.73■□□□□ 0.11
MID1O15344 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.73■□□□□ 0.11
MID1O15344 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.73■□□□□ 0.11
MID1O15344 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC15.73■□□□□ 0.11
MID1O15344 AC133552.6-201ENST00000613406 534 ntBASIC15.73■□□□□ 0.11
MID1O15344 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
MID1O15344 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
MID1O15344 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
MID1O15344 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
MID1O15344 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
MID1O15344 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.73■□□□□ 0.11
MID1O15344 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
MID1O15344 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
MID1O15344 AC006449.5-201ENST00000610658 2098 ntBASIC15.72■□□□□ 0.11
MID1O15344 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
MID1O15344 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
MID1O15344 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
MID1O15344 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
MID1O15344 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
MID1O15344 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.72■□□□□ 0.11
MID1O15344 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
MID1O15344 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
MID1O15344 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
MID1O15344 ANKRD19P-201ENST00000338192 862 ntBASIC15.72■□□□□ 0.11
MID1O15344 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
MID1O15344 BOLA2P3-201ENST00000404566 256 ntBASIC15.72■□□□□ 0.11
MID1O15344 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
MID1O15344 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
MID1O15344 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.72■□□□□ 0.11
MID1O15344 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.72■□□□□ 0.11
MID1O15344 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
MID1O15344 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC15.72■□□□□ 0.11
MID1O15344 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC15.72■□□□□ 0.11
MID1O15344 BCRP2-202ENST00000447763 634 ntBASIC15.72■□□□□ 0.11
MID1O15344 KRT223P-202ENST00000449164 1292 ntBASIC15.72■□□□□ 0.11
MID1O15344 BCRP6-201ENST00000510112 632 ntBASIC15.72■□□□□ 0.11
MID1O15344 BCRP7-201ENST00000511549 544 ntBASIC15.72■□□□□ 0.11
MID1O15344 AC068587.3-201ENST00000526613 355 ntBASIC15.72■□□□□ 0.11
MID1O15344 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
MID1O15344 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.72■□□□□ 0.11
MID1O15344 CLUHP6-201ENST00000580789 941 ntBASIC15.72■□□□□ 0.11
MID1O15344 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
MID1O15344 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
MID1O15344 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.72■□□□□ 0.11
MID1O15344 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC15.72■□□□□ 0.11
MID1O15344 WNT11-204ENST00000621122 789 ntTSL 5 BASIC15.72■□□□□ 0.11
MID1O15344 COX11-210ENST00000639671 696 ntBASIC15.72■□□□□ 0.11
MID1O15344 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.72■□□□□ 0.11
MID1O15344 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
MID1O15344 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
MID1O15344 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
MID1O15344 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.72■□□□□ 0.11
MID1O15344 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.72■□□□□ 0.11
MID1O15344 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.72■□□□□ 0.11
MID1O15344 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
MID1O15344 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
MID1O15344 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
MID1O15344 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.72■□□□□ 0.11
MID1O15344 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
MID1O15344 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
MID1O15344 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.72■□□□□ 0.11
MID1O15344 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
MID1O15344 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
MID1O15344 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.71■□□□□ 0.11
MID1O15344 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
MID1O15344 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
MID1O15344 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
MID1O15344 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
MID1O15344 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MID1O15344 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.71■□□□□ 0.11
MID1O15344 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
MID1O15344 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
MID1O15344 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MID1O15344 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC15.71■□□□□ 0.11
MID1O15344 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MID1O15344 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MID1O15344 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.71■□□□□ 0.11
MID1O15344 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
MID1O15344 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
MID1O15344 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
MID1O15344 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms