Protein–RNA interactions for Protein: H3BVE0

BOLA2-SMG1P6, BOLA2-SMG1P6 readthrough (Fragment), humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BOLA2-SMG1P6H3BVE0 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 GRIPAP1-207ENST00000593475 2908 ntTSL 5 BASIC13.79□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC13.79□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 CARHSP1-202ENST00000396593 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 AC015818.8-201ENST00000587907 1519 ntBASIC13.79□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC13.79□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC13.79□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC13.79□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 PARP3-202ENST00000417220 2472 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 AL135999.2-201ENST00000622438 1686 ntBASIC13.79□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC13.78□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.78□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC13.78□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC13.78□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.78□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.78□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 LINC01301-202ENST00000506428 2444 ntTSL 2 BASIC13.78□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 UNC93B2-201ENST00000285383 730 ntBASIC13.78□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC13.78□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC13.78□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC13.78□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC13.78□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC13.78□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC13.78□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC13.78□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 AL021920.2-201ENST00000624828 1351 ntBASIC13.78□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC13.78□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.78□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC13.78□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.78□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.78□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC13.78□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC13.78□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC13.77□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC13.77□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
BOLA2-SMG1P6H3BVE0 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC13.77□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 TRMT2B-202ENST00000372936 3327 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC13.77□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC13.77□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 FAM8A3P-201ENST00000427218 844 ntBASIC13.77□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 KRT42P-202ENST00000438131 2895 ntTSL 2 BASIC13.77□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.77□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC13.77□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC13.77□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC13.77□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 AC023090.2-201ENST00000625182 2110 ntBASIC13.77□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
BOLA2-SMG1P6H3BVE0 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms