Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TMEM88BA6NKF7 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TMEM88BA6NKF7 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TMEM88BA6NKF7 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TMEM88BA6NKF7 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TMEM88BA6NKF7 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TMEM88BA6NKF7 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TMEM88BA6NKF7 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TMEM88BA6NKF7 AL512430.1-201ENST00000392575 860 ntBASIC17.94■□□□□ 0.46
TMEM88BA6NKF7 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC17.94■□□□□ 0.46
TMEM88BA6NKF7 AL592076.1-201ENST00000424448 303 ntBASIC17.94■□□□□ 0.46
TMEM88BA6NKF7 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC17.94■□□□□ 0.46
TMEM88BA6NKF7 ALG1L6P-201ENST00000515248 758 ntBASIC17.94■□□□□ 0.46
TMEM88BA6NKF7 AC012158.2-201ENST00000536546 354 ntBASIC17.94■□□□□ 0.46
TMEM88BA6NKF7 MIR4783-201ENST00000580343 82 ntBASIC17.94■□□□□ 0.46
TMEM88BA6NKF7 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC17.94■□□□□ 0.46
TMEM88BA6NKF7 RPL17P45-201ENST00000586289 509 ntBASIC17.94■□□□□ 0.46
TMEM88BA6NKF7 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC17.94■□□□□ 0.46
TMEM88BA6NKF7 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC17.94■□□□□ 0.46
TMEM88BA6NKF7 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TMEM88BA6NKF7 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TMEM88BA6NKF7 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.94■□□□□ 0.46
TMEM88BA6NKF7 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TMEM88BA6NKF7 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TMEM88BA6NKF7 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.94■□□□□ 0.46
TMEM88BA6NKF7 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TMEM88BA6NKF7 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TMEM88BA6NKF7 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.93■□□□□ 0.46
TMEM88BA6NKF7 CAP2P1-201ENST00000557743 1390 ntBASIC17.93■□□□□ 0.46
TMEM88BA6NKF7 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
TMEM88BA6NKF7 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
TMEM88BA6NKF7 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
TMEM88BA6NKF7 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC17.93■□□□□ 0.46
TMEM88BA6NKF7 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.93■□□□□ 0.46
TMEM88BA6NKF7 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC17.93■□□□□ 0.46
TMEM88BA6NKF7 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TMEM88BA6NKF7 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TMEM88BA6NKF7 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TMEM88BA6NKF7 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC17.93■□□□□ 0.46
TMEM88BA6NKF7 RPL8P2-201ENST00000430538 502 ntBASIC17.93■□□□□ 0.46
TMEM88BA6NKF7 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC17.93■□□□□ 0.46
TMEM88BA6NKF7 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC17.93■□□□□ 0.46
TMEM88BA6NKF7 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
TMEM88BA6NKF7 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC17.93■□□□□ 0.46
TMEM88BA6NKF7 AC026803.1-201ENST00000569130 274 ntBASIC17.93■□□□□ 0.46
TMEM88BA6NKF7 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC17.93■□□□□ 0.46
TMEM88BA6NKF7 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC17.93■□□□□ 0.46
TMEM88BA6NKF7 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TMEM88BA6NKF7 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TMEM88BA6NKF7 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
TMEM88BA6NKF7 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TMEM88BA6NKF7 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
TMEM88BA6NKF7 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
TMEM88BA6NKF7 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TMEM88BA6NKF7 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
TMEM88BA6NKF7 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TMEM88BA6NKF7 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TMEM88BA6NKF7 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TMEM88BA6NKF7 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TMEM88BA6NKF7 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TMEM88BA6NKF7 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TMEM88BA6NKF7 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
TMEM88BA6NKF7 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TMEM88BA6NKF7 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.92■□□□□ 0.46
TMEM88BA6NKF7 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
TMEM88BA6NKF7 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TMEM88BA6NKF7 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TMEM88BA6NKF7 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TMEM88BA6NKF7 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC17.92■□□□□ 0.46
TMEM88BA6NKF7 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TMEM88BA6NKF7 AC239868.1-201ENST00000369385 493 ntBASIC17.92■□□□□ 0.46
TMEM88BA6NKF7 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TMEM88BA6NKF7 AP003398.1-201ENST00000531124 318 ntBASIC17.92■□□□□ 0.46
TMEM88BA6NKF7 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TMEM88BA6NKF7 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC17.92■□□□□ 0.46
TMEM88BA6NKF7 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC17.92■□□□□ 0.46
TMEM88BA6NKF7 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC17.92■□□□□ 0.46
TMEM88BA6NKF7 AC009955.4-201ENST00000597192 544 ntBASIC17.92■□□□□ 0.46
TMEM88BA6NKF7 AC005632.3-201ENST00000605544 308 ntBASIC17.92■□□□□ 0.46
TMEM88BA6NKF7 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC17.92■□□□□ 0.46
TMEM88BA6NKF7 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TMEM88BA6NKF7 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
TMEM88BA6NKF7 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TMEM88BA6NKF7 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
TMEM88BA6NKF7 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
TMEM88BA6NKF7 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TMEM88BA6NKF7 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TMEM88BA6NKF7 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TMEM88BA6NKF7 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
TMEM88BA6NKF7 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TMEM88BA6NKF7 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TMEM88BA6NKF7 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TMEM88BA6NKF7 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TMEM88BA6NKF7 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TMEM88BA6NKF7 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TMEM88BA6NKF7 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TMEM88BA6NKF7 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.91■□□□□ 0.46
TMEM88BA6NKF7 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
TMEM88BA6NKF7 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TMEM88BA6NKF7 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms