Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHB9Q9Y5E1 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC23.74■■□□□ 1.39
PCDHB9Q9Y5E1 KRT16P3-201ENST00000439127 1283 ntBASIC23.74■■□□□ 1.39
PCDHB9Q9Y5E1 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC23.74■■□□□ 1.39
PCDHB9Q9Y5E1 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHB9Q9Y5E1 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC23.74■■□□□ 1.39
PCDHB9Q9Y5E1 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHB9Q9Y5E1 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHB9Q9Y5E1 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHB9Q9Y5E1 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHB9Q9Y5E1 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHB9Q9Y5E1 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
PCDHB9Q9Y5E1 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC23.73■■□□□ 1.39
PCDHB9Q9Y5E1 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC23.73■■□□□ 1.39
PCDHB9Q9Y5E1 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHB9Q9Y5E1 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHB9Q9Y5E1 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHB9Q9Y5E1 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHB9Q9Y5E1 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHB9Q9Y5E1 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC23.72■■□□□ 1.39
PCDHB9Q9Y5E1 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
PCDHB9Q9Y5E1 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
PCDHB9Q9Y5E1 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHB9Q9Y5E1 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHB9Q9Y5E1 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC23.72■■□□□ 1.39
PCDHB9Q9Y5E1 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHB9Q9Y5E1 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHB9Q9Y5E1 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHB9Q9Y5E1 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHB9Q9Y5E1 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC23.71■■□□□ 1.39
PCDHB9Q9Y5E1 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
PCDHB9Q9Y5E1 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHB9Q9Y5E1 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC23.71■■□□□ 1.39
PCDHB9Q9Y5E1 RALB-208ENST00000631312 311 ntTSL 5 BASIC23.71■■□□□ 1.39
PCDHB9Q9Y5E1 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHB9Q9Y5E1 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHB9Q9Y5E1 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC23.71■■□□□ 1.39
PCDHB9Q9Y5E1 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC23.7■■□□□ 1.39
PCDHB9Q9Y5E1 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
PCDHB9Q9Y5E1 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
PCDHB9Q9Y5E1 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
PCDHB9Q9Y5E1 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PCDHB9Q9Y5E1 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PCDHB9Q9Y5E1 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
PCDHB9Q9Y5E1 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC23.7■■□□□ 1.38
PCDHB9Q9Y5E1 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PCDHB9Q9Y5E1 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
PCDHB9Q9Y5E1 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
PCDHB9Q9Y5E1 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
PCDHB9Q9Y5E1 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC23.69■■□□□ 1.38
PCDHB9Q9Y5E1 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHB9Q9Y5E1 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHB9Q9Y5E1 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
PCDHB9Q9Y5E1 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHB9Q9Y5E1 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHB9Q9Y5E1 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHB9Q9Y5E1 AC022211.4-201ENST00000625094 2161 ntBASIC23.68■■□□□ 1.38
PCDHB9Q9Y5E1 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHB9Q9Y5E1 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC23.68■■□□□ 1.38
PCDHB9Q9Y5E1 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC23.68■■□□□ 1.38
PCDHB9Q9Y5E1 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC23.68■■□□□ 1.38
PCDHB9Q9Y5E1 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHB9Q9Y5E1 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHB9Q9Y5E1 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
PCDHB9Q9Y5E1 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
PCDHB9Q9Y5E1 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHB9Q9Y5E1 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC23.67■■□□□ 1.38
PCDHB9Q9Y5E1 UNC93B8-201ENST00000511903 705 ntBASIC23.67■■□□□ 1.38
PCDHB9Q9Y5E1 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC23.67■■□□□ 1.38
PCDHB9Q9Y5E1 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC23.67■■□□□ 1.38
PCDHB9Q9Y5E1 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
PCDHB9Q9Y5E1 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHB9Q9Y5E1 KRT18P24-201ENST00000344739 1156 ntBASIC23.66■■□□□ 1.38
PCDHB9Q9Y5E1 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC23.66■■□□□ 1.38
PCDHB9Q9Y5E1 AC120024.1-201ENST00000562672 995 ntBASIC23.66■■□□□ 1.38
PCDHB9Q9Y5E1 SSSCA1-AS1-201ENST00000567594 614 ntBASIC23.66■■□□□ 1.38
PCDHB9Q9Y5E1 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHB9Q9Y5E1 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC23.66■■□□□ 1.38
PCDHB9Q9Y5E1 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
PCDHB9Q9Y5E1 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PCDHB9Q9Y5E1 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PCDHB9Q9Y5E1 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
PCDHB9Q9Y5E1 MIR638-201ENST00000385237 100 ntBASIC23.65■■□□□ 1.38
PCDHB9Q9Y5E1 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC23.65■■□□□ 1.38
PCDHB9Q9Y5E1 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
PCDHB9Q9Y5E1 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC23.65■■□□□ 1.38
PCDHB9Q9Y5E1 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC23.65■■□□□ 1.38
PCDHB9Q9Y5E1 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PCDHB9Q9Y5E1 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PCDHB9Q9Y5E1 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
PCDHB9Q9Y5E1 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PCDHB9Q9Y5E1 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
PCDHB9Q9Y5E1 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC23.64■■□□□ 1.37
PCDHB9Q9Y5E1 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC23.64■■□□□ 1.37
PCDHB9Q9Y5E1 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
PCDHB9Q9Y5E1 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHB9Q9Y5E1 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHB9Q9Y5E1 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHB9Q9Y5E1 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHB9Q9Y5E1 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms