Protein–RNA interactions for Protein: Q9Y279

VSIG4, V-set and immunoglobulin domain-containing protein 4, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG4Q9Y279 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
VSIG4Q9Y279 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VSIG4Q9Y279 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VSIG4Q9Y279 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.66■□□□□ 0.74
VSIG4Q9Y279 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.65■□□□□ 0.74
VSIG4Q9Y279 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
VSIG4Q9Y279 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
VSIG4Q9Y279 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC19.65■□□□□ 0.74
VSIG4Q9Y279 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC19.65■□□□□ 0.74
VSIG4Q9Y279 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC19.65■□□□□ 0.74
VSIG4Q9Y279 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.65■□□□□ 0.74
VSIG4Q9Y279 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
VSIG4Q9Y279 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
VSIG4Q9Y279 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VSIG4Q9Y279 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VSIG4Q9Y279 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.64■□□□□ 0.74
VSIG4Q9Y279 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
VSIG4Q9Y279 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
VSIG4Q9Y279 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
VSIG4Q9Y279 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
VSIG4Q9Y279 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
VSIG4Q9Y279 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VSIG4Q9Y279 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VSIG4Q9Y279 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.64■□□□□ 0.73
VSIG4Q9Y279 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
VSIG4Q9Y279 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.63■□□□□ 0.73
VSIG4Q9Y279 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
VSIG4Q9Y279 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.63■□□□□ 0.73
VSIG4Q9Y279 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.63■□□□□ 0.73
VSIG4Q9Y279 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.63■□□□□ 0.73
VSIG4Q9Y279 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VSIG4Q9Y279 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VSIG4Q9Y279 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC19.63■□□□□ 0.73
VSIG4Q9Y279 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
VSIG4Q9Y279 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VSIG4Q9Y279 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
VSIG4Q9Y279 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
VSIG4Q9Y279 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
VSIG4Q9Y279 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
VSIG4Q9Y279 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
VSIG4Q9Y279 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VSIG4Q9Y279 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC19.62■□□□□ 0.73
VSIG4Q9Y279 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VSIG4Q9Y279 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
VSIG4Q9Y279 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
VSIG4Q9Y279 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VSIG4Q9Y279 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
VSIG4Q9Y279 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
VSIG4Q9Y279 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VSIG4Q9Y279 AL117328.2-201ENST00000624617 1940 ntBASIC19.61■□□□□ 0.73
VSIG4Q9Y279 CHST11-203ENST00000547956 936 ntTSL 2 BASIC19.61■□□□□ 0.73
VSIG4Q9Y279 AC148477.6-201ENST00000623746 465 ntBASIC19.61■□□□□ 0.73
VSIG4Q9Y279 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC19.61■□□□□ 0.73
VSIG4Q9Y279 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.61■□□□□ 0.73
VSIG4Q9Y279 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
VSIG4Q9Y279 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
VSIG4Q9Y279 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
VSIG4Q9Y279 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VSIG4Q9Y279 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
VSIG4Q9Y279 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
VSIG4Q9Y279 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.6■□□□□ 0.73
VSIG4Q9Y279 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
VSIG4Q9Y279 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
VSIG4Q9Y279 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
VSIG4Q9Y279 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VSIG4Q9Y279 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VSIG4Q9Y279 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
VSIG4Q9Y279 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VSIG4Q9Y279 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
VSIG4Q9Y279 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VSIG4Q9Y279 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
VSIG4Q9Y279 TPT1-202ENST00000379055 948 ntTSL 2 BASIC19.59■□□□□ 0.73
VSIG4Q9Y279 MIR6089-201ENST00000616698 64 ntBASIC19.59■□□□□ 0.73
VSIG4Q9Y279 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
VSIG4Q9Y279 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VSIG4Q9Y279 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
VSIG4Q9Y279 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
VSIG4Q9Y279 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
VSIG4Q9Y279 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.58■□□□□ 0.73
VSIG4Q9Y279 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.58■□□□□ 0.73
VSIG4Q9Y279 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
VSIG4Q9Y279 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
VSIG4Q9Y279 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC19.58■□□□□ 0.72
VSIG4Q9Y279 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
VSIG4Q9Y279 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.57■□□□□ 0.72
VSIG4Q9Y279 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
VSIG4Q9Y279 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
VSIG4Q9Y279 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
VSIG4Q9Y279 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.57■□□□□ 0.72
VSIG4Q9Y279 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
VSIG4Q9Y279 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
VSIG4Q9Y279 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
VSIG4Q9Y279 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
VSIG4Q9Y279 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.56■□□□□ 0.72
VSIG4Q9Y279 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.56■□□□□ 0.72
VSIG4Q9Y279 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VSIG4Q9Y279 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.56■□□□□ 0.72
VSIG4Q9Y279 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC19.56■□□□□ 0.72
VSIG4Q9Y279 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
VSIG4Q9Y279 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms