Protein–RNA interactions for Protein: Q9NZI7

UBP1, Upstream-binding protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1Q9NZI7 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
UBP1Q9NZI7 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC23.75■■□□□ 1.39
UBP1Q9NZI7 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC23.75■■□□□ 1.39
UBP1Q9NZI7 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
UBP1Q9NZI7 PVT1_1.1-201ENST00000615125 194 ntBASIC23.75■■□□□ 1.39
UBP1Q9NZI7 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
UBP1Q9NZI7 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
UBP1Q9NZI7 EED-207ENST00000528180 1745 ntTSL 5 BASIC23.74■■□□□ 1.39
UBP1Q9NZI7 AL592295.1-201ENST00000400984 884 ntBASIC23.74■■□□□ 1.39
UBP1Q9NZI7 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
UBP1Q9NZI7 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC23.74■■□□□ 1.39
UBP1Q9NZI7 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
UBP1Q9NZI7 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
UBP1Q9NZI7 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC23.74■■□□□ 1.39
UBP1Q9NZI7 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC23.74■■□□□ 1.39
UBP1Q9NZI7 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC23.74■■□□□ 1.39
UBP1Q9NZI7 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
UBP1Q9NZI7 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC23.73■■□□□ 1.39
UBP1Q9NZI7 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
UBP1Q9NZI7 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
UBP1Q9NZI7 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
UBP1Q9NZI7 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
UBP1Q9NZI7 BEX3-202ENST00000372634 753 ntTSL 2 BASIC23.73■■□□□ 1.39
UBP1Q9NZI7 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC23.73■■□□□ 1.39
UBP1Q9NZI7 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC23.73■■□□□ 1.39
UBP1Q9NZI7 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC23.73■■□□□ 1.39
UBP1Q9NZI7 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC23.73■■□□□ 1.39
UBP1Q9NZI7 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
UBP1Q9NZI7 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
UBP1Q9NZI7 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
UBP1Q9NZI7 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC23.72■■□□□ 1.39
UBP1Q9NZI7 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
UBP1Q9NZI7 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
UBP1Q9NZI7 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
UBP1Q9NZI7 HLA-L-211ENST00000482052 1765 ntBASIC23.72■■□□□ 1.39
UBP1Q9NZI7 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
UBP1Q9NZI7 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
UBP1Q9NZI7 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
UBP1Q9NZI7 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC23.71■■□□□ 1.39
UBP1Q9NZI7 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
UBP1Q9NZI7 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
UBP1Q9NZI7 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
UBP1Q9NZI7 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC23.71■■□□□ 1.39
UBP1Q9NZI7 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
UBP1Q9NZI7 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
UBP1Q9NZI7 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
UBP1Q9NZI7 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
UBP1Q9NZI7 MTX2-204ENST00000443241 799 ntTSL 3 BASIC23.7■■□□□ 1.38
UBP1Q9NZI7 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC23.7■■□□□ 1.38
UBP1Q9NZI7 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC23.7■■□□□ 1.38
UBP1Q9NZI7 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC23.69■■□□□ 1.38
UBP1Q9NZI7 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC23.69■■□□□ 1.38
UBP1Q9NZI7 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
UBP1Q9NZI7 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
UBP1Q9NZI7 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC23.69■■□□□ 1.38
UBP1Q9NZI7 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
UBP1Q9NZI7 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
UBP1Q9NZI7 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
UBP1Q9NZI7 AC090877.2-201ENST00000558441 1738 ntBASIC23.68■■□□□ 1.38
UBP1Q9NZI7 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
UBP1Q9NZI7 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
UBP1Q9NZI7 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC23.68■■□□□ 1.38
UBP1Q9NZI7 AC019171.1-201ENST00000601251 1056 ntBASIC23.68■■□□□ 1.38
UBP1Q9NZI7 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
UBP1Q9NZI7 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
UBP1Q9NZI7 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC23.67■■□□□ 1.38
UBP1Q9NZI7 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC23.67■■□□□ 1.38
UBP1Q9NZI7 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
UBP1Q9NZI7 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
UBP1Q9NZI7 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC23.67■■□□□ 1.38
UBP1Q9NZI7 IDNK-201ENST00000376417 511 ntTSL 5 BASIC23.67■■□□□ 1.38
UBP1Q9NZI7 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
UBP1Q9NZI7 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
UBP1Q9NZI7 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC23.67■■□□□ 1.38
UBP1Q9NZI7 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC23.67■■□□□ 1.38
UBP1Q9NZI7 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
UBP1Q9NZI7 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC23.67■■□□□ 1.38
UBP1Q9NZI7 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
UBP1Q9NZI7 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
UBP1Q9NZI7 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
UBP1Q9NZI7 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
UBP1Q9NZI7 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
UBP1Q9NZI7 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
UBP1Q9NZI7 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
UBP1Q9NZI7 AC074183.2-201ENST00000623112 922 ntBASIC23.66■■□□□ 1.38
UBP1Q9NZI7 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
UBP1Q9NZI7 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
UBP1Q9NZI7 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
UBP1Q9NZI7 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
UBP1Q9NZI7 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
UBP1Q9NZI7 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC23.65■■□□□ 1.38
UBP1Q9NZI7 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
UBP1Q9NZI7 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC23.65■■□□□ 1.38
UBP1Q9NZI7 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
UBP1Q9NZI7 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC23.65■■□□□ 1.38
UBP1Q9NZI7 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC23.64■■□□□ 1.38
UBP1Q9NZI7 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
UBP1Q9NZI7 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
UBP1Q9NZI7 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
UBP1Q9NZI7 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC23.64■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms