Protein–RNA interactions for Protein: Q9H5U6

ZCCHC4, Zinc finger CCHC domain-containing protein 4, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC4Q9H5U6 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ZCCHC4Q9H5U6 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.47■□□□□ 0.87
ZCCHC4Q9H5U6 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
ZCCHC4Q9H5U6 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.47■□□□□ 0.87
ZCCHC4Q9H5U6 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ZCCHC4Q9H5U6 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ZCCHC4Q9H5U6 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
ZCCHC4Q9H5U6 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ZCCHC4Q9H5U6 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.47■□□□□ 0.87
ZCCHC4Q9H5U6 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
ZCCHC4Q9H5U6 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ZCCHC4Q9H5U6 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
ZCCHC4Q9H5U6 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.46■□□□□ 0.87
ZCCHC4Q9H5U6 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.46■□□□□ 0.87
ZCCHC4Q9H5U6 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.46■□□□□ 0.87
ZCCHC4Q9H5U6 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ZCCHC4Q9H5U6 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
ZCCHC4Q9H5U6 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ZCCHC4Q9H5U6 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
ZCCHC4Q9H5U6 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ZCCHC4Q9H5U6 MIR6089-201ENST00000616698 64 ntBASIC20.45■□□□□ 0.86
ZCCHC4Q9H5U6 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ZCCHC4Q9H5U6 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.45■□□□□ 0.86
ZCCHC4Q9H5U6 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
ZCCHC4Q9H5U6 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
ZCCHC4Q9H5U6 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ZCCHC4Q9H5U6 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
ZCCHC4Q9H5U6 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.44■□□□□ 0.86
ZCCHC4Q9H5U6 TPT1-202ENST00000379055 948 ntTSL 2 BASIC20.44■□□□□ 0.86
ZCCHC4Q9H5U6 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ZCCHC4Q9H5U6 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.44■□□□□ 0.86
ZCCHC4Q9H5U6 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ZCCHC4Q9H5U6 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.44■□□□□ 0.86
ZCCHC4Q9H5U6 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.44■□□□□ 0.86
ZCCHC4Q9H5U6 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ZCCHC4Q9H5U6 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.44■□□□□ 0.86
ZCCHC4Q9H5U6 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ZCCHC4Q9H5U6 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
ZCCHC4Q9H5U6 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ZCCHC4Q9H5U6 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
ZCCHC4Q9H5U6 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC20.43■□□□□ 0.86
ZCCHC4Q9H5U6 AC092296.2-201ENST00000589470 999 ntBASIC20.43■□□□□ 0.86
ZCCHC4Q9H5U6 MIR7108-201ENST00000614319 87 ntBASIC20.43■□□□□ 0.86
ZCCHC4Q9H5U6 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
ZCCHC4Q9H5U6 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ZCCHC4Q9H5U6 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ZCCHC4Q9H5U6 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ZCCHC4Q9H5U6 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
ZCCHC4Q9H5U6 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ZCCHC4Q9H5U6 CLDN5-201ENST00000403084 2357 ntBASIC20.42■□□□□ 0.86
ZCCHC4Q9H5U6 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
ZCCHC4Q9H5U6 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
ZCCHC4Q9H5U6 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ZCCHC4Q9H5U6 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
ZCCHC4Q9H5U6 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ZCCHC4Q9H5U6 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.42■□□□□ 0.86
ZCCHC4Q9H5U6 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ZCCHC4Q9H5U6 ABCB10P4-201ENST00000566803 2184 ntBASIC20.42■□□□□ 0.86
ZCCHC4Q9H5U6 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
ZCCHC4Q9H5U6 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.41■□□□□ 0.86
ZCCHC4Q9H5U6 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.41■□□□□ 0.86
ZCCHC4Q9H5U6 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ZCCHC4Q9H5U6 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.41■□□□□ 0.86
ZCCHC4Q9H5U6 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.41■□□□□ 0.86
ZCCHC4Q9H5U6 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ZCCHC4Q9H5U6 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ZCCHC4Q9H5U6 ECEL1P2-201ENST00000461596 1295 ntBASIC20.4■□□□□ 0.86
ZCCHC4Q9H5U6 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.4■□□□□ 0.86
ZCCHC4Q9H5U6 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
ZCCHC4Q9H5U6 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ZCCHC4Q9H5U6 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
ZCCHC4Q9H5U6 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
ZCCHC4Q9H5U6 MIR639-201ENST00000384974 98 ntBASIC20.39■□□□□ 0.85
ZCCHC4Q9H5U6 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
ZCCHC4Q9H5U6 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
ZCCHC4Q9H5U6 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ZCCHC4Q9H5U6 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
ZCCHC4Q9H5U6 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ZCCHC4Q9H5U6 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
ZCCHC4Q9H5U6 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ZCCHC4Q9H5U6 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ZCCHC4Q9H5U6 RP9P-202ENST00000450133 1212 ntBASIC20.38■□□□□ 0.85
ZCCHC4Q9H5U6 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ZCCHC4Q9H5U6 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ZCCHC4Q9H5U6 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ZCCHC4Q9H5U6 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
ZCCHC4Q9H5U6 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ZCCHC4Q9H5U6 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ZCCHC4Q9H5U6 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
ZCCHC4Q9H5U6 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ZCCHC4Q9H5U6 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
ZCCHC4Q9H5U6 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ZCCHC4Q9H5U6 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ZCCHC4Q9H5U6 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ZCCHC4Q9H5U6 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ZCCHC4Q9H5U6 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ZCCHC4Q9H5U6 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
ZCCHC4Q9H5U6 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.36■□□□□ 0.85
ZCCHC4Q9H5U6 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ZCCHC4Q9H5U6 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 13 ms