Protein–RNA interactions for Protein: Q9H204

MED28, Mediator of RNA polymerase II transcription subunit 28, humanhuman

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MED28Q9H204 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
MED28Q9H204 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC19.88■□□□□ 0.77
MED28Q9H204 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.88■□□□□ 0.77
MED28Q9H204 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC19.88■□□□□ 0.77
MED28Q9H204 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MED28Q9H204 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MED28Q9H204 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
MED28Q9H204 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
MED28Q9H204 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC19.87■□□□□ 0.77
MED28Q9H204 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.87■□□□□ 0.77
MED28Q9H204 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
MED28Q9H204 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MED28Q9H204 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
MED28Q9H204 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MED28Q9H204 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
MED28Q9H204 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MED28Q9H204 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
MED28Q9H204 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
MED28Q9H204 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
MED28Q9H204 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MED28Q9H204 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
MED28Q9H204 AC127496.7-201ENST00000625110 1798 ntBASIC19.85■□□□□ 0.77
MED28Q9H204 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.85■□□□□ 0.77
MED28Q9H204 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
MED28Q9H204 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MED28Q9H204 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
MED28Q9H204 LINC00526-201ENST00000581067 1875 ntBASIC19.85■□□□□ 0.77
MED28Q9H204 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MED28Q9H204 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
MED28Q9H204 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
MED28Q9H204 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC19.85■□□□□ 0.77
MED28Q9H204 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
MED28Q9H204 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
MED28Q9H204 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
MED28Q9H204 SLC25A24-204ENST00000569674 2357 ntBASIC19.84■□□□□ 0.77
MED28Q9H204 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
MED28Q9H204 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC19.84■□□□□ 0.77
MED28Q9H204 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.84■□□□□ 0.77
MED28Q9H204 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MED28Q9H204 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
MED28Q9H204 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.84■□□□□ 0.77
MED28Q9H204 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
MED28Q9H204 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
MED28Q9H204 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
MED28Q9H204 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
MED28Q9H204 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
MED28Q9H204 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
MED28Q9H204 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
MED28Q9H204 AC007375.3-201ENST00000600936 2314 ntBASIC19.82■□□□□ 0.76
MED28Q9H204 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
MED28Q9H204 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
MED28Q9H204 LINC00273-201ENST00000539813 1452 ntBASIC19.82■□□□□ 0.76
MED28Q9H204 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MED28Q9H204 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
MED28Q9H204 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
MED28Q9H204 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MED28Q9H204 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MED28Q9H204 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MED28Q9H204 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.82■□□□□ 0.76
MED28Q9H204 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.81■□□□□ 0.76
MED28Q9H204 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
MED28Q9H204 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC19.81■□□□□ 0.76
MED28Q9H204 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MED28Q9H204 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MED28Q9H204 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MED28Q9H204 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MED28Q9H204 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
MED28Q9H204 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
MED28Q9H204 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
MED28Q9H204 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
MED28Q9H204 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MED28Q9H204 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
MED28Q9H204 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
MED28Q9H204 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MED28Q9H204 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.8■□□□□ 0.76
MED28Q9H204 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
MED28Q9H204 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MED28Q9H204 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MED28Q9H204 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MED28Q9H204 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MED28Q9H204 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.79■□□□□ 0.76
MED28Q9H204 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.79■□□□□ 0.76
MED28Q9H204 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
MED28Q9H204 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MED28Q9H204 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MED28Q9H204 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MED28Q9H204 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
MED28Q9H204 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC19.78■□□□□ 0.76
MED28Q9H204 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
MED28Q9H204 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.78■□□□□ 0.76
MED28Q9H204 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
MED28Q9H204 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MED28Q9H204 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
MED28Q9H204 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
MED28Q9H204 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.78■□□□□ 0.76
MED28Q9H204 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
MED28Q9H204 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
MED28Q9H204 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.77■□□□□ 0.76
MED28Q9H204 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.77■□□□□ 0.76
MED28Q9H204 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms