Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC28.77■■■□□ 2.2
RTFDC1Q9BY42 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
RTFDC1Q9BY42 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC28.76■■■□□ 2.2
RTFDC1Q9BY42 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC28.76■■■□□ 2.19
RTFDC1Q9BY42 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
RTFDC1Q9BY42 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC28.76■■■□□ 2.19
RTFDC1Q9BY42 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
RTFDC1Q9BY42 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC28.76■■■□□ 2.19
RTFDC1Q9BY42 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
RTFDC1Q9BY42 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC28.76■■■□□ 2.19
RTFDC1Q9BY42 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
RTFDC1Q9BY42 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
RTFDC1Q9BY42 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC28.75■■■□□ 2.19
RTFDC1Q9BY42 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC28.75■■■□□ 2.19
RTFDC1Q9BY42 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
RTFDC1Q9BY42 AL136162.1-201ENST00000607711 1078 ntBASIC28.75■■■□□ 2.19
RTFDC1Q9BY42 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC28.75■■■□□ 2.19
RTFDC1Q9BY42 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
RTFDC1Q9BY42 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC28.74■■■□□ 2.19
RTFDC1Q9BY42 LBH-205ENST00000407930 756 ntTSL 2 BASIC28.74■■■□□ 2.19
RTFDC1Q9BY42 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC28.74■■■□□ 2.19
RTFDC1Q9BY42 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC28.73■■■□□ 2.19
RTFDC1Q9BY42 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
RTFDC1Q9BY42 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC28.73■■■□□ 2.19
RTFDC1Q9BY42 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
RTFDC1Q9BY42 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC28.73■■■□□ 2.19
RTFDC1Q9BY42 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC28.73■■■□□ 2.19
RTFDC1Q9BY42 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC28.73■■■□□ 2.19
RTFDC1Q9BY42 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC28.72■■■□□ 2.19
RTFDC1Q9BY42 AC135279.3-201ENST00000610945 1311 ntBASIC28.72■■■□□ 2.19
RTFDC1Q9BY42 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC28.72■■■□□ 2.19
RTFDC1Q9BY42 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC28.72■■■□□ 2.19
RTFDC1Q9BY42 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC28.72■■■□□ 2.19
RTFDC1Q9BY42 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC28.72■■■□□ 2.19
RTFDC1Q9BY42 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
RTFDC1Q9BY42 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
RTFDC1Q9BY42 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
RTFDC1Q9BY42 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
RTFDC1Q9BY42 EDA-201ENST00000338901 1233 ntBASIC28.71■■■□□ 2.19
RTFDC1Q9BY42 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
RTFDC1Q9BY42 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC28.71■■■□□ 2.19
RTFDC1Q9BY42 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC28.71■■■□□ 2.19
RTFDC1Q9BY42 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC28.7■■■□□ 2.19
RTFDC1Q9BY42 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
RTFDC1Q9BY42 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
RTFDC1Q9BY42 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
RTFDC1Q9BY42 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC28.69■■■□□ 2.18
RTFDC1Q9BY42 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC28.69■■■□□ 2.18
RTFDC1Q9BY42 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC28.69■■■□□ 2.18
RTFDC1Q9BY42 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC28.69■■■□□ 2.18
RTFDC1Q9BY42 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC28.68■■■□□ 2.18
RTFDC1Q9BY42 SRD5A1P1-201ENST00000442297 786 ntBASIC28.68■■■□□ 2.18
RTFDC1Q9BY42 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC28.68■■■□□ 2.18
RTFDC1Q9BY42 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC28.68■■■□□ 2.18
RTFDC1Q9BY42 AC024257.2-201ENST00000549699 147 ntBASIC28.68■■■□□ 2.18
RTFDC1Q9BY42 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC28.68■■■□□ 2.18
RTFDC1Q9BY42 AC092666.2-201ENST00000613287 246 ntBASIC28.68■■■□□ 2.18
RTFDC1Q9BY42 AL355001.2-201ENST00000620617 1191 ntBASIC28.68■■■□□ 2.18
RTFDC1Q9BY42 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC28.68■■■□□ 2.18
RTFDC1Q9BY42 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
RTFDC1Q9BY42 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC28.68■■■□□ 2.18
RTFDC1Q9BY42 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
RTFDC1Q9BY42 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
RTFDC1Q9BY42 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
RTFDC1Q9BY42 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC28.67■■■□□ 2.18
RTFDC1Q9BY42 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC28.67■■■□□ 2.18
RTFDC1Q9BY42 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
RTFDC1Q9BY42 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
RTFDC1Q9BY42 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC28.66■■■□□ 2.18
RTFDC1Q9BY42 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC28.66■■■□□ 2.18
RTFDC1Q9BY42 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC28.66■■■□□ 2.18
RTFDC1Q9BY42 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
RTFDC1Q9BY42 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC28.65■■■□□ 2.18
RTFDC1Q9BY42 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC28.64■■■□□ 2.18
RTFDC1Q9BY42 GATM-206ENST00000558336 1522 ntTSL 2 BASIC28.64■■■□□ 2.18
RTFDC1Q9BY42 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC28.64■■■□□ 2.18
RTFDC1Q9BY42 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
RTFDC1Q9BY42 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC28.64■■■□□ 2.18
RTFDC1Q9BY42 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
RTFDC1Q9BY42 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC28.64■■■□□ 2.18
RTFDC1Q9BY42 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
RTFDC1Q9BY42 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
RTFDC1Q9BY42 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
RTFDC1Q9BY42 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
RTFDC1Q9BY42 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC28.62■■■□□ 2.17
RTFDC1Q9BY42 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
RTFDC1Q9BY42 LGR4-203ENST00000480977 492 ntTSL 2 BASIC28.62■■■□□ 2.17
RTFDC1Q9BY42 AL136967.2-201ENST00000623968 743 ntBASIC28.62■■■□□ 2.17
RTFDC1Q9BY42 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
RTFDC1Q9BY42 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC28.62■■■□□ 2.17
RTFDC1Q9BY42 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC28.61■■■□□ 2.17
RTFDC1Q9BY42 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC28.61■■■□□ 2.17
RTFDC1Q9BY42 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
RTFDC1Q9BY42 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
RTFDC1Q9BY42 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
RTFDC1Q9BY42 HYI-206ENST00000372434 1025 ntTSL 5 BASIC28.61■■■□□ 2.17
RTFDC1Q9BY42 AC004448.1-201ENST00000458332 883 ntBASIC28.61■■■□□ 2.17
RTFDC1Q9BY42 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC28.61■■■□□ 2.17
RTFDC1Q9BY42 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC28.61■■■□□ 2.17
RTFDC1Q9BY42 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms