Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CMTM3Q96MX0 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
CMTM3Q96MX0 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CMTM3Q96MX0 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC20.07■□□□□ 0.8
CMTM3Q96MX0 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.07■□□□□ 0.8
CMTM3Q96MX0 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CMTM3Q96MX0 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CMTM3Q96MX0 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CMTM3Q96MX0 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CMTM3Q96MX0 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CMTM3Q96MX0 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CMTM3Q96MX0 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CMTM3Q96MX0 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CMTM3Q96MX0 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CMTM3Q96MX0 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CMTM3Q96MX0 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CMTM3Q96MX0 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CMTM3Q96MX0 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CMTM3Q96MX0 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.06■□□□□ 0.8
CMTM3Q96MX0 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CMTM3Q96MX0 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CMTM3Q96MX0 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CMTM3Q96MX0 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CMTM3Q96MX0 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CMTM3Q96MX0 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CMTM3Q96MX0 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CMTM3Q96MX0 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.04■□□□□ 0.8
CMTM3Q96MX0 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CMTM3Q96MX0 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CMTM3Q96MX0 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CMTM3Q96MX0 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CMTM3Q96MX0 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CMTM3Q96MX0 CHST11-202ENST00000546689 756 ntTSL 2 BASIC20.04■□□□□ 0.8
CMTM3Q96MX0 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC20.04■□□□□ 0.8
CMTM3Q96MX0 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.04■□□□□ 0.8
CMTM3Q96MX0 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CMTM3Q96MX0 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CMTM3Q96MX0 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
CMTM3Q96MX0 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CMTM3Q96MX0 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CMTM3Q96MX0 AC126177.7-201ENST00000547904 679 ntBASIC20.03■□□□□ 0.8
CMTM3Q96MX0 DUX4L13-201ENST00000554103 1267 ntBASIC20.03■□□□□ 0.8
CMTM3Q96MX0 DUX4L15-201ENST00000611059 1267 ntBASIC20.03■□□□□ 0.8
CMTM3Q96MX0 DUX4L23-201ENST00000615195 1269 ntBASIC20.03■□□□□ 0.8
CMTM3Q96MX0 DUX4L24-201ENST00000617576 1269 ntBASIC20.03■□□□□ 0.8
CMTM3Q96MX0 DUX4L22-201ENST00000618238 1269 ntBASIC20.03■□□□□ 0.8
CMTM3Q96MX0 DUX4L20-201ENST00000619712 1269 ntBASIC20.03■□□□□ 0.8
CMTM3Q96MX0 DUX4L21-201ENST00000622058 1269 ntBASIC20.03■□□□□ 0.8
CMTM3Q96MX0 DUX4L10-201ENST00000622460 1267 ntBASIC20.03■□□□□ 0.8
CMTM3Q96MX0 DUX4L25-201ENST00000624915 1269 ntBASIC20.03■□□□□ 0.8
CMTM3Q96MX0 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.03■□□□□ 0.8
CMTM3Q96MX0 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.03■□□□□ 0.8
CMTM3Q96MX0 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CMTM3Q96MX0 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CMTM3Q96MX0 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CMTM3Q96MX0 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.02■□□□□ 0.8
CMTM3Q96MX0 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.02■□□□□ 0.8
CMTM3Q96MX0 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.02■□□□□ 0.8
CMTM3Q96MX0 LINC01971-201ENST00000617888 1048 ntBASIC20.02■□□□□ 0.8
CMTM3Q96MX0 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.02■□□□□ 0.8
CMTM3Q96MX0 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
CMTM3Q96MX0 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CMTM3Q96MX0 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
CMTM3Q96MX0 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CMTM3Q96MX0 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.02■□□□□ 0.79
CMTM3Q96MX0 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CMTM3Q96MX0 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CMTM3Q96MX0 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CMTM3Q96MX0 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CMTM3Q96MX0 AC127496.7-201ENST00000625110 1798 ntBASIC20.01■□□□□ 0.79
CMTM3Q96MX0 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CMTM3Q96MX0 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CMTM3Q96MX0 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CMTM3Q96MX0 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CMTM3Q96MX0 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.01■□□□□ 0.79
CMTM3Q96MX0 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CMTM3Q96MX0 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.01■□□□□ 0.79
CMTM3Q96MX0 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CMTM3Q96MX0 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CMTM3Q96MX0 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CMTM3Q96MX0 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CMTM3Q96MX0 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
CMTM3Q96MX0 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20■□□□□ 0.79
CMTM3Q96MX0 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CMTM3Q96MX0 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CMTM3Q96MX0 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CMTM3Q96MX0 LINC00565-201ENST00000562710 2331 ntBASIC20■□□□□ 0.79
CMTM3Q96MX0 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC20■□□□□ 0.79
CMTM3Q96MX0 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20■□□□□ 0.79
CMTM3Q96MX0 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CMTM3Q96MX0 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CMTM3Q96MX0 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CMTM3Q96MX0 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CMTM3Q96MX0 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CMTM3Q96MX0 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CMTM3Q96MX0 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
CMTM3Q96MX0 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CMTM3Q96MX0 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.99■□□□□ 0.79
CMTM3Q96MX0 NRG1-221ENST00000614767 762 ntTSL 5 BASIC19.99■□□□□ 0.79
CMTM3Q96MX0 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms