Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
SMARCC1Q92922 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC30.28■■■□□ 2.44
SMARCC1Q92922 GATM-206ENST00000558336 1522 ntTSL 2 BASIC30.28■■■□□ 2.44
SMARCC1Q92922 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC30.28■■■□□ 2.44
SMARCC1Q92922 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC30.28■■■□□ 2.44
SMARCC1Q92922 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
SMARCC1Q92922 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC30.28■■■□□ 2.44
SMARCC1Q92922 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC30.28■■■□□ 2.44
SMARCC1Q92922 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC30.28■■■□□ 2.44
SMARCC1Q92922 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
SMARCC1Q92922 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC30.27■■■□□ 2.44
SMARCC1Q92922 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC30.27■■■□□ 2.44
SMARCC1Q92922 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
SMARCC1Q92922 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC30.27■■■□□ 2.44
SMARCC1Q92922 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC30.27■■■□□ 2.44
SMARCC1Q92922 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC30.27■■■□□ 2.44
SMARCC1Q92922 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC30.27■■■□□ 2.44
SMARCC1Q92922 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
SMARCC1Q92922 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC30.26■■■□□ 2.43
SMARCC1Q92922 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC30.26■■■□□ 2.43
SMARCC1Q92922 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
SMARCC1Q92922 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC30.25■■■□□ 2.43
SMARCC1Q92922 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
SMARCC1Q92922 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC30.25■■■□□ 2.43
SMARCC1Q92922 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
SMARCC1Q92922 AL136967.2-201ENST00000623968 743 ntBASIC30.25■■■□□ 2.43
SMARCC1Q92922 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC30.25■■■□□ 2.43
SMARCC1Q92922 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC30.25■■■□□ 2.43
SMARCC1Q92922 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
SMARCC1Q92922 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC30.24■■■□□ 2.43
SMARCC1Q92922 AC105265.2-201ENST00000467189 838 ntBASIC30.24■■■□□ 2.43
SMARCC1Q92922 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC30.24■■■□□ 2.43
SMARCC1Q92922 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
SMARCC1Q92922 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC30.24■■■□□ 2.43
SMARCC1Q92922 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
SMARCC1Q92922 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC30.23■■■□□ 2.43
SMARCC1Q92922 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
SMARCC1Q92922 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC30.23■■■□□ 2.43
SMARCC1Q92922 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
SMARCC1Q92922 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
SMARCC1Q92922 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
SMARCC1Q92922 DUX4L19-201ENST00000557448 1267 ntBASIC30.23■■■□□ 2.43
SMARCC1Q92922 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
SMARCC1Q92922 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
SMARCC1Q92922 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
SMARCC1Q92922 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC30.22■■■□□ 2.43
SMARCC1Q92922 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC30.22■■■□□ 2.43
SMARCC1Q92922 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC30.21■■■□□ 2.43
SMARCC1Q92922 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC30.21■■■□□ 2.43
SMARCC1Q92922 AF213884.3-201ENST00000563833 479 ntBASIC30.21■■■□□ 2.43
SMARCC1Q92922 GRAMD4P4-201ENST00000613563 1115 ntBASIC30.21■■■□□ 2.43
SMARCC1Q92922 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
SMARCC1Q92922 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
SMARCC1Q92922 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
SMARCC1Q92922 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
SMARCC1Q92922 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
SMARCC1Q92922 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC30.19■■■□□ 2.42
SMARCC1Q92922 MIR939-201ENST00000401314 82 ntBASIC30.19■■■□□ 2.42
SMARCC1Q92922 AC004448.1-201ENST00000458332 883 ntBASIC30.19■■■□□ 2.42
SMARCC1Q92922 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC30.19■■■□□ 2.42
SMARCC1Q92922 SF1-220ENST00000626028 704 ntTSL 2 BASIC30.19■■■□□ 2.42
SMARCC1Q92922 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
SMARCC1Q92922 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC30.19■■■□□ 2.42
SMARCC1Q92922 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
SMARCC1Q92922 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
SMARCC1Q92922 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC30.18■■■□□ 2.42
SMARCC1Q92922 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC30.18■■■□□ 2.42
SMARCC1Q92922 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC30.18■■■□□ 2.42
SMARCC1Q92922 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
SMARCC1Q92922 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC30.18■■■□□ 2.42
SMARCC1Q92922 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC30.18■■■□□ 2.42
SMARCC1Q92922 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC30.18■■■□□ 2.42
SMARCC1Q92922 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
SMARCC1Q92922 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
SMARCC1Q92922 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC30.16■■■□□ 2.42
SMARCC1Q92922 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC30.16■■■□□ 2.42
SMARCC1Q92922 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC30.16■■■□□ 2.42
SMARCC1Q92922 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC30.16■■■□□ 2.42
SMARCC1Q92922 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC30.16■■■□□ 2.42
SMARCC1Q92922 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC30.16■■■□□ 2.42
SMARCC1Q92922 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC30.15■■■□□ 2.42
SMARCC1Q92922 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC30.15■■■□□ 2.42
SMARCC1Q92922 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
SMARCC1Q92922 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC30.15■■■□□ 2.42
SMARCC1Q92922 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC30.15■■■□□ 2.42
SMARCC1Q92922 AP001330.3-201ENST00000520123 633 ntBASIC30.15■■■□□ 2.42
SMARCC1Q92922 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC30.15■■■□□ 2.42
SMARCC1Q92922 AC142086.6-201ENST00000621154 1765 ntBASIC30.14■■■□□ 2.42
SMARCC1Q92922 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC30.14■■■□□ 2.42
SMARCC1Q92922 AC005703.6-201ENST00000623265 1329 ntBASIC30.14■■■□□ 2.42
SMARCC1Q92922 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.41
SMARCC1Q92922 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.41
SMARCC1Q92922 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.41
SMARCC1Q92922 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
SMARCC1Q92922 RBM38-205ENST00000440234 686 ntTSL 2 BASIC30.13■■■□□ 2.41
SMARCC1Q92922 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC30.13■■■□□ 2.41
SMARCC1Q92922 AC091305.1-201ENST00000479476 895 ntBASIC30.13■■■□□ 2.41
SMARCC1Q92922 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
SMARCC1Q92922 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
SMARCC1Q92922 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms