Protein–RNA interactions for Protein: Q8WUY9

DEPDC1B, DEP domain-containing protein 1B, humanhuman

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1BQ8WUY9 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC24.69■■□□□ 1.54
DEPDC1BQ8WUY9 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
DEPDC1BQ8WUY9 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC24.69■■□□□ 1.54
DEPDC1BQ8WUY9 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
DEPDC1BQ8WUY9 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
DEPDC1BQ8WUY9 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
DEPDC1BQ8WUY9 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC24.68■■□□□ 1.54
DEPDC1BQ8WUY9 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC24.68■■□□□ 1.54
DEPDC1BQ8WUY9 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC24.68■■□□□ 1.54
DEPDC1BQ8WUY9 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC24.67■■□□□ 1.54
DEPDC1BQ8WUY9 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
DEPDC1BQ8WUY9 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
DEPDC1BQ8WUY9 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
DEPDC1BQ8WUY9 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
DEPDC1BQ8WUY9 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
DEPDC1BQ8WUY9 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC24.66■■□□□ 1.54
DEPDC1BQ8WUY9 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC24.66■■□□□ 1.54
DEPDC1BQ8WUY9 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC24.65■■□□□ 1.54
DEPDC1BQ8WUY9 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC24.65■■□□□ 1.54
DEPDC1BQ8WUY9 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC24.65■■□□□ 1.54
DEPDC1BQ8WUY9 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC24.65■■□□□ 1.54
DEPDC1BQ8WUY9 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC24.65■■□□□ 1.54
DEPDC1BQ8WUY9 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
DEPDC1BQ8WUY9 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC24.64■■□□□ 1.54
DEPDC1BQ8WUY9 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC24.64■■□□□ 1.54
DEPDC1BQ8WUY9 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC24.64■■□□□ 1.54
DEPDC1BQ8WUY9 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC24.64■■□□□ 1.54
DEPDC1BQ8WUY9 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.53
DEPDC1BQ8WUY9 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
DEPDC1BQ8WUY9 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC24.63■■□□□ 1.53
DEPDC1BQ8WUY9 AC011551.1-201ENST00000614101 683 ntBASIC24.63■■□□□ 1.53
DEPDC1BQ8WUY9 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC24.63■■□□□ 1.53
DEPDC1BQ8WUY9 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
DEPDC1BQ8WUY9 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
DEPDC1BQ8WUY9 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC24.62■■□□□ 1.53
DEPDC1BQ8WUY9 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC24.62■■□□□ 1.53
DEPDC1BQ8WUY9 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC24.62■■□□□ 1.53
DEPDC1BQ8WUY9 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
DEPDC1BQ8WUY9 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
DEPDC1BQ8WUY9 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
DEPDC1BQ8WUY9 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
DEPDC1BQ8WUY9 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC24.6■■□□□ 1.53
DEPDC1BQ8WUY9 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
DEPDC1BQ8WUY9 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC24.6■■□□□ 1.53
DEPDC1BQ8WUY9 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC24.6■■□□□ 1.53
DEPDC1BQ8WUY9 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
DEPDC1BQ8WUY9 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
DEPDC1BQ8WUY9 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC24.59■■□□□ 1.53
DEPDC1BQ8WUY9 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
DEPDC1BQ8WUY9 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
DEPDC1BQ8WUY9 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC24.59■■□□□ 1.53
DEPDC1BQ8WUY9 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
DEPDC1BQ8WUY9 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
DEPDC1BQ8WUY9 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
DEPDC1BQ8WUY9 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
DEPDC1BQ8WUY9 RPP21-222ENST00000433076 577 ntTSL 2 BASIC24.58■■□□□ 1.53
DEPDC1BQ8WUY9 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
DEPDC1BQ8WUY9 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC24.58■■□□□ 1.52
DEPDC1BQ8WUY9 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
DEPDC1BQ8WUY9 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
DEPDC1BQ8WUY9 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
DEPDC1BQ8WUY9 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC24.57■■□□□ 1.52
DEPDC1BQ8WUY9 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC24.57■■□□□ 1.52
DEPDC1BQ8WUY9 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC24.57■■□□□ 1.52
DEPDC1BQ8WUY9 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
DEPDC1BQ8WUY9 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC24.57■■□□□ 1.52
DEPDC1BQ8WUY9 SRR-208ENST00000576848 588 ntTSL 4 BASIC24.57■■□□□ 1.52
DEPDC1BQ8WUY9 TRIR-202ENST00000588213 841 ntTSL 3 BASIC24.57■■□□□ 1.52
DEPDC1BQ8WUY9 AC010997.5-201ENST00000609182 354 ntBASIC24.57■■□□□ 1.52
DEPDC1BQ8WUY9 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
DEPDC1BQ8WUY9 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
DEPDC1BQ8WUY9 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC24.57■■□□□ 1.52
DEPDC1BQ8WUY9 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC24.57■■□□□ 1.52
DEPDC1BQ8WUY9 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
DEPDC1BQ8WUY9 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
DEPDC1BQ8WUY9 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC24.56■■□□□ 1.52
DEPDC1BQ8WUY9 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC24.56■■□□□ 1.52
DEPDC1BQ8WUY9 AC131281.2-201ENST00000520478 145 ntBASIC24.56■■□□□ 1.52
DEPDC1BQ8WUY9 GAK-223ENST00000628912 497 ntTSL 5 BASIC24.56■■□□□ 1.52
DEPDC1BQ8WUY9 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
DEPDC1BQ8WUY9 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC24.55■■□□□ 1.52
DEPDC1BQ8WUY9 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC24.55■■□□□ 1.52
DEPDC1BQ8WUY9 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC24.55■■□□□ 1.52
DEPDC1BQ8WUY9 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC24.55■■□□□ 1.52
DEPDC1BQ8WUY9 MTDHP2-201ENST00000601468 714 ntBASIC24.55■■□□□ 1.52
DEPDC1BQ8WUY9 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
DEPDC1BQ8WUY9 SNAI3-AS1-204ENST00000567997 2048 ntBASIC24.55■■□□□ 1.52
DEPDC1BQ8WUY9 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
DEPDC1BQ8WUY9 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
DEPDC1BQ8WUY9 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
DEPDC1BQ8WUY9 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
DEPDC1BQ8WUY9 MIR638-201ENST00000385237 100 ntBASIC24.54■■□□□ 1.52
DEPDC1BQ8WUY9 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC24.54■■□□□ 1.52
DEPDC1BQ8WUY9 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC24.54■■□□□ 1.52
DEPDC1BQ8WUY9 AL139246.5-201ENST00000606645 996 ntBASIC24.54■■□□□ 1.52
DEPDC1BQ8WUY9 MIR6724-1-201ENST00000616420 92 ntBASIC24.54■■□□□ 1.52
DEPDC1BQ8WUY9 MIR6724-2-201ENST00000616483 92 ntBASIC24.54■■□□□ 1.52
DEPDC1BQ8WUY9 MIR6724-4-201ENST00000617390 92 ntBASIC24.54■■□□□ 1.52
DEPDC1BQ8WUY9 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC24.54■■□□□ 1.52
DEPDC1BQ8WUY9 MIR6724-3-201ENST00000622482 92 ntBASIC24.54■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms