Protein–RNA interactions for Protein: Q86U42

PABPN1, Polyadenylate-binding protein 2, humanhuman

Known RBP eCLIP

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1Q86U42 HEXDC-204ENST00000578130 853 ntTSL 234.68■■■■□ 3.147e-7■■■■□ 20
PABPN1Q86U42 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC33.87■■■■□ 3.017e-7■■■■□ 20
PABPN1Q86U42 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC32.44■■■□□ 2.787e-7■■■■□ 20
PABPN1Q86U42 AP1G2-232ENST00000557391 459 ntTSL 216.9■□□□□ 0.36e-10■■■■□ 20
PABPN1Q86U42 LLGL2-208ENST00000578034 485 ntTSL 234.89■■■■□ 3.182e-7■■■■□ 20
PABPN1Q86U42 MST1-208ENST00000484144 878 ntTSL 234.59■■■■□ 3.132e-14■■■■□ 20
PABPN1Q86U42 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC35.2■■■■□ 3.234e-8■■■■□ 20
PABPN1Q86U42 INF2-208ENST00000481338 1102 ntTSL 236.77■■■■□ 3.481e-6■■■■□ 19.9
PABPN1Q86U42 LMBR1L-220ENST00000551272 472 ntTSL 229.96■■■□□ 2.393e-9■■■■□ 19.9
PABPN1Q86U42 NADSYN1-206ENST00000525593 928 ntTSL 523.9■■□□□ 1.423e-7■■■■□ 19.9
PABPN1Q86U42 SRRT-211ENST00000478693 655 ntTSL 221.92■■□□□ 1.12e-6■■■■□ 19.9
PABPN1Q86U42 MMS19-201ENST00000327238 3165 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.724e-7■■■■□ 19.9
PABPN1Q86U42 MMS19-209ENST00000438925 3797 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.624e-7■■■■□ 19.9
PABPN1Q86U42 MMS19-204ENST00000415383 3401 ntTSL 1 (best)18.88■□□□□ 0.614e-7■■■■□ 19.9
PABPN1Q86U42 MMS19-203ENST00000370782 3532 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.384e-7■■■■□ 19.9
PABPN1Q86U42 MMS19-207ENST00000434538 2164 ntTSL 216.79■□□□□ 0.284e-7■■■■□ 19.9
PABPN1Q86U42 MMS19-202ENST00000355839 3555 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.164e-7■■■■□ 19.9
PABPN1Q86U42 RBM5-210ENST00000461242 275 ntTSL 512.37□□□□□ -0.431e-9■■■■□ 19.8
PABPN1Q86U42 RHBG-201ENST00000451864 1927 ntTSL 237.98■■■■□ 3.672e-7■■■■□ 19.8
PABPN1Q86U42 RHBG-208ENST00000620376 1984 ntTSL 237.8■■■■□ 3.642e-7■■■■□ 19.8
PABPN1Q86U42 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.182e-7■■■■□ 19.8
PABPN1Q86U42 RHBG-205ENST00000612897 1862 ntTSL 1 (best)28.36■■■□□ 2.132e-7■■■■□ 19.8
PABPN1Q86U42 RHBG-206ENST00000613460 1912 ntTSL 1 (best)26.67■■□□□ 1.862e-7■■■■□ 19.8
PABPN1Q86U42 RHBG-207ENST00000618120 2424 ntTSL 221.61■■□□□ 1.052e-7■■■■□ 19.8
PABPN1Q86U42 MST1-215ENST00000492329 2006 ntTSL 534.31■■■■□ 3.084e-9■■■■□ 19.8
PABPN1Q86U42 MST1-204ENST00000479115 2285 ntTSL 533.64■■■□□ 2.984e-9■■■■□ 19.8
PABPN1Q86U42 LUC7L-206ENST00000419516 1211 ntTSL 525.82■■□□□ 1.721e-7■■■■□ 19.8
PABPN1Q86U42 LUC7L-220ENST00000495349 1006 ntTSL 225.14■■□□□ 1.621e-7■■■■□ 19.8
PABPN1Q86U42 LUC7L-203ENST00000397780 1335 ntTSL 5 BASIC24.86■■□□□ 1.571e-7■■■■□ 19.8
PABPN1Q86U42 DDX56-204ENST00000431640 1554 ntTSL 1 (best) BASIC22.85■■□□□ 1.256e-7■■■■□ 19.8
PABPN1Q86U42 FANCA-223ENST00000567284 479 ntTSL 317.55■□□□□ 0.43e-7■■■■□ 19.8
PABPN1Q86U42 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.182e-6■■■■□ 19.8
PABPN1Q86U42 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC22.53■■□□□ 1.25e-7■■■■□ 19.8
PABPN1Q86U42 TBCD-201ENST00000355528 7168 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.15e-7■■■■□ 19.8
PABPN1Q86U42 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC44.91■■■■■ 4.781e-6■■■■□ 19.8
PABPN1Q86U42 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC44.08■■■■■ 4.651e-6■■■■□ 19.8
PABPN1Q86U42 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC38.39■■■■□ 3.741e-6■■■■□ 19.8
PABPN1Q86U42 PNCK-221ENST00000466074 1564 ntTSL 238.07■■■■□ 3.691e-6■■■■□ 19.8
PABPN1Q86U42 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC33.3■■■□□ 2.921e-6■■■■□ 19.8
PABPN1Q86U42 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC31.41■■■□□ 2.621e-6■■■■□ 19.8
PABPN1Q86U42 PNCK-224ENST00000472324 2143 ntTSL 1 (best)28.75■■■□□ 2.191e-6■■■■□ 19.8
PABPN1Q86U42 PLXNA3-201ENST00000369682 10885 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.162e-6■■■■□ 19.8
PABPN1Q86U42 SSBP4-210ENST00000601444 427 ntTSL 539.52■■■■□ 3.924e-7■■■■□ 19.8
PABPN1Q86U42 ABCC6-203ENST00000574094 2260 ntTSL 521.55■■□□□ 1.043e-6■■■■□ 19.7
PABPN1Q86U42 DROSHA-202ENST00000442743 4991 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.168e-7■■■■□ 19.7
PABPN1Q86U42 DROSHA-220ENST00000513349 4681 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.428e-7■■■■□ 19.7
PABPN1Q86U42 DROSHA-201ENST00000344624 5102 ntAPPRIS P4 TSL 5 BASIC11.37□□□□□ -0.598e-7■■■■□ 19.7
PABPN1Q86U42 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.78e-7■■■■□ 19.7
PABPN1Q86U42 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.752e-6■■■■□ 19.7
PABPN1Q86U42 SRSF11-204ENST00000395136 1408 ntTSL 1 (best)51.42■■■■■ 5.822e-6■■■■□ 19.7
PABPN1Q86U42 SRSF11-211ENST00000473950 796 ntTSL 548.17■■■■■ 5.32e-6■■■■□ 19.7
PABPN1Q86U42 SRSF11-212ENST00000475204 760 ntTSL 545.7■■■■■ 4.912e-6■■■■□ 19.7
PABPN1Q86U42 SRSF11-213ENST00000481648 389 ntTSL 320.12■□□□□ 0.812e-6■■■■□ 19.7
PABPN1Q86U42 SRSF11-215ENST00000486667 662 ntTSL 518.14■□□□□ 0.492e-6■■■■□ 19.7
PABPN1Q86U42 CHRD-203ENST00000356534 1252 ntTSL 1 (best)40.4■■■■■ 4.061e-7■■■■□ 19.7
PABPN1Q86U42 LCAT-209ENST00000576450 359 ntTSL 224.46■■□□□ 1.511e-7■■■■□ 19.7
PABPN1Q86U42 LCAT-203ENST00000570396 322 ntTSL 320.06■□□□□ 0.81e-7■■■■□ 19.7
PABPN1Q86U42 KAT2A-203ENST00000586972 852 ntTSL 238.83■■■■□ 3.817e-10■■■■□ 19.7
PABPN1Q86U42 SPG7-203ENST00000561702 2042 ntTSL 225.02■■□□□ 1.63e-7■■■■□ 19.7
PABPN1Q86U42 CFB-271ENST00000425368 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.62e-7■■■■□ 19.6
PABPN1Q86U42 AL645922.1-202ENST00000477310 3377 ntTSL 5 BASIC17.03■□□□□ 0.322e-7■■■■□ 19.6
PABPN1Q86U42 AL645922.1-201ENST00000456570 3874 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.142e-7■■■■□ 19.6
PABPN1Q86U42 CFB-282ENST00000483004 940 ntTSL 514.45□□□□□ -0.12e-7■■■■□ 19.6
PABPN1Q86U42 SLC22A31-202ENST00000562916 692 ntTSL 543.74■■■■■ 4.592e-7■■■■□ 19.6
PABPN1Q86U42 VARS2-208ENST00000477052 552 ntTSL 324.47■■□□□ 1.511e-7■■■■□ 19.6
PABPN1Q86U42 INTS1-206ENST00000493446 675 ntTSL 325.36■■□□□ 1.653e-7■■■■□ 19.6
PABPN1Q86U42 NPEPL1-205ENST00000527081 2061 ntTSL 228.16■■■□□ 2.19e-8■■■■□ 19.6
PABPN1Q86U42 NDUFV1-209ENST00000527355 679 ntTSL 231.23■■■□□ 2.596e-7■■■■□ 19.6
PABPN1Q86U42 HSF4-205ENST00000517750 546 ntTSL 530.93■■■□□ 2.543e-7■■■■□ 19.6
PABPN1Q86U42 SMTN-224ENST00000624247 1263 ntTSL 543.26■■■■■ 4.523e-10■■■■□ 19.6
PABPN1Q86U42 SMTN-212ENST00000455608 648 ntTSL 339.71■■■■□ 3.953e-10■■■■□ 19.6
PABPN1Q86U42 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC36.23■■■■□ 3.393e-10■■■■□ 19.6
PABPN1Q86U42 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC22.27■■□□□ 1.163e-10■■■■□ 19.6
PABPN1Q86U42 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC22.07■■□□□ 1.123e-10■■■■□ 19.6
PABPN1Q86U42 SMTN-219ENST00000493335 2937 ntTSL 221.73■■□□□ 1.073e-10■■■■□ 19.6
PABPN1Q86U42 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC20.95■□□□□ 0.943e-10■■■■□ 19.6
PABPN1Q86U42 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.883e-10■■■■□ 19.6
PABPN1Q86U42 SMTN-222ENST00000612341 3321 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.873e-10■■■■□ 19.6
PABPN1Q86U42 SMTN-218ENST00000489337 3560 ntTSL 219.59■□□□□ 0.733e-10■■■■□ 19.6
PABPN1Q86U42 SMTN-213ENST00000460658 5080 ntTSL 519.52■□□□□ 0.713e-10■■■■□ 19.6
PABPN1Q86U42 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.543e-10■■■■□ 19.6
PABPN1Q86U42 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC39.5■■■■□ 3.913e-7■■■■□ 19.6
PABPN1Q86U42 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.013e-7■■■■□ 19.6
PABPN1Q86U42 NDUFV1-220ENST00000531250 736 ntTSL 237.69■■■■□ 3.627e-7■■■■□ 19.6
PABPN1Q86U42 TBCD-209ENST00000572794 1380 ntTSL 234.47■■■■□ 3.114e-7■■■■□ 19.5
PABPN1Q86U42 TBCD-208ENST00000572389 776 ntTSL 233.9■■■■□ 3.024e-7■■■■□ 19.5
PABPN1Q86U42 NOC2L-204ENST00000483767 1611 ntTSL 234.27■■■■□ 3.083e-7■■■■□ 19.5
PABPN1Q86U42 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.343e-7■■■■□ 19.5
PABPN1Q86U42 NOC2L-203ENST00000477976 4201 ntTSL 518.08■□□□□ 0.493e-7■■■■□ 19.5
PABPN1Q86U42 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.157e-9■■■■□ 19.5
PABPN1Q86U42 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.314e-9■■■■□ 19.5
PABPN1Q86U42 MST1-211ENST00000488350 4152 ntTSL 520.36■□□□□ 0.854e-9■■■■□ 19.5
PABPN1Q86U42 WDR13-207ENST00000482760 562 ntTSL 327.94■■■□□ 2.066e-7■■■■□ 19.5
PABPN1Q86U42 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC33.23■■■□□ 2.917e-7■■■■□ 19.5
PABPN1Q86U42 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC23.27■■□□□ 1.327e-7■■■■□ 19.5
PABPN1Q86U42 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC36.56■■■■□ 3.442e-6■■■■□ 19.5
PABPN1Q86U42 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC32.47■■■□□ 2.792e-6■■■■□ 19.5
PABPN1Q86U42 RHBG-203ENST00000494874 324 ntTSL 319.95■□□□□ 0.786e-8■■■■□ 19.5
PABPN1Q86U42 SARS2-207ENST00000597490 308 ntTSL 534.3■■■■□ 3.089e-10■■■■□ 19.5
PABPN1Q86U42 SNRNP200-206ENST00000484372 581 ntTSL 224.46■■□□□ 1.519e-10■■■■□ 19.5
Retrieved 100 of 8,254 protein–RNA pairs in 174.8 ms