RNA–Protein interactions for RNA: ENST00000493335.5

SMTN-219, Transcript of smoothelin, humanhuman

TSL 2

Gene SMTN, Length 2,937 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-219ENST00000493335 NISCHQ9Y2I1 1504 aa28.47■■■□□ 2.15
SMTN-219ENST00000493335 SHROOM4Q9ULL8 1493 aa25.57■■□□□ 1.68
SMTN-219ENST00000493335 SUPT5HO00267 1087 aaKnown RBP25.37■■□□□ 1.65
SMTN-219ENST00000493335 HRCP23327 699 aa24.63■■□□□ 1.53
SMTN-219ENST00000493335 DCAF8L2P0C7V8 631 aa24.63■■□□□ 1.53
SMTN-219ENST00000493335 PCGF6Q9BYE7 350 aa24.63■■□□□ 1.53
SMTN-219ENST00000493335 CHIC1Q5VXU3 224 aa24.48■■□□□ 1.51
SMTN-219ENST00000493335 PPARGC1BQ86YN6 1023 aaKnown RBP24.43■■□□□ 1.5
SMTN-219ENST00000493335 MYO15BQ96JP2 1530 aa24.43■■□□□ 1.5
SMTN-219ENST00000493335 LOC105371045A0A1W2PR82 267 aa24.12■■□□□ 1.45
SMTN-219ENST00000493335 ZCCHC6Q5VYS8 1495 aaKnown RBP24.09■■□□□ 1.45
SMTN-219ENST00000493335 PELP1Q8IZL8 1130 aaKnown RBP23.91■■□□□ 1.42
SMTN-219ENST00000493335 TRIM26Q12899 539 aaPredicted RBP23.68■■□□□ 1.38
SMTN-219ENST00000493335 EHMT2Q96KQ7 1210 aa23.68■■□□□ 1.38
SMTN-219ENST00000493335 DCAF1Q9Y4B6 1507 aa23.61■■□□□ 1.37
SMTN-219ENST00000493335 FAM9AQ8IZU1 332 aaPredicted RBP23.56■■□□□ 1.36
SMTN-219ENST00000493335 CCDC180Q9P1Z9 1646 aa23.54■■□□□ 1.36
SMTN-219ENST00000493335 TRIM41Q8WV44 630 aa23.35■■□□□ 1.33
SMTN-219ENST00000493335 ZEB1P37275 1124 aaPredicted RBP23.27■■□□□ 1.32
SMTN-219ENST00000493335 SCAF1Q9H7N4 1312 aaKnown RBP23.17■■□□□ 1.3
SMTN-219ENST00000493335 MYT1Q01538 1121 aa23.13■■□□□ 1.29
SMTN-219ENST00000493335 TTBK1Q5TCY1 1321 aaPredicted RBP22.99■■□□□ 1.27
SMTN-219ENST00000493335 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.97■■□□□ 1.27
SMTN-219ENST00000493335 CCER1Q8TC90 406 aaPredicted RBP22.91■■□□□ 1.26
SMTN-219ENST00000493335 RSF1Q96T23 1441 aaPredicted RBP22.91■■□□□ 1.26
SMTN-219ENST00000493335 SCRIBQ14160 1630 aa22.81■■□□□ 1.24
SMTN-219ENST00000493335 ABCC9O60706 1549 aa22.79■■□□□ 1.24
SMTN-219ENST00000493335 RB1CC1Q8TDY2 1594 aa22.74■■□□□ 1.23
SMTN-219ENST00000493335 NEUROD1Q13562 356 aa22.74■■□□□ 1.23
SMTN-219ENST00000493335 ACIN1Q9UKV3 1341 aaKnown RBP22.69■■□□□ 1.22
SMTN-219ENST00000493335 DIEXFQ68CQ4 756 aaKnown RBP22.63■■□□□ 1.21
SMTN-219ENST00000493335 GTF3C3Q9Y5Q9 886 aa22.63■■□□□ 1.21
SMTN-219ENST00000493335 CENPBP07199 599 aaPredicted RBP22.55■■□□□ 1.2
SMTN-219ENST00000493335 YTHDC1Q96MU7 727 aaKnown RBP22.51■■□□□ 1.19
SMTN-219ENST00000493335 CECR2Q9BXF3 1484 aa22.47■■□□□ 1.19
SMTN-219ENST00000493335 MROH2BQ7Z745 1585 aa22.32■■□□□ 1.16
SMTN-219ENST00000493335 UBTFP17480 764 aaKnown RBP22.31■■□□□ 1.16
SMTN-219ENST00000493335 HNRNPUL2Q1KMD3 747 aaKnown RBP22.21■■□□□ 1.15
SMTN-219ENST00000493335 WIZO95785 1651 aa22.2■■□□□ 1.14
SMTN-219ENST00000493335 ZNF316A6NFI3 1004 aaPredicted RBP22.2■■□□□ 1.14
SMTN-219ENST00000493335 RANGAP1P46060 587 aaPredicted RBP22.14■■□□□ 1.14
SMTN-219ENST00000493335 CEP162Q5TB80 1403 aa22.12■■□□□ 1.13
SMTN-219ENST00000493335 MIER1Q8N108 512 aa22.09■■□□□ 1.13
SMTN-219ENST00000493335 ABCC8Q09428 1581 aa22.09■■□□□ 1.13
SMTN-219ENST00000493335 CCDC88BA6NC98 1476 aa22.08■■□□□ 1.13
SMTN-219ENST00000493335 SOGA1O94964 1423 aa22.06■■□□□ 1.12
SMTN-219ENST00000493335 CSRNP3Q8WYN3 585 aa22.02■■□□□ 1.12
SMTN-219ENST00000493335 NACADO15069 1562 aa21.94■■□□□ 1.1
SMTN-219ENST00000493335 WRNQ14191 1432 aaPredicted RBP eCLIP21.91■■□□□ 1.1
SMTN-219ENST00000493335 RUSC2Q8N2Y8 1516 aa21.91■■□□□ 1.1
SMTN-219ENST00000493335 TNIKQ9UKE5 1360 aa21.9■■□□□ 1.1
SMTN-219ENST00000493335 APLP2Q06481 763 aa21.9■■□□□ 1.1
SMTN-219ENST00000493335 BAZ1AQ9NRL2 1556 aaPredicted RBP21.85■■□□□ 1.09
SMTN-219ENST00000493335 EIF4G1Q04637 1599 aaKnown RBP21.73■■□□□ 1.07
SMTN-219ENST00000493335 PABPN1Q86U42 306 aaKnown RBP eCLIP21.73■■□□□ 1.073e-10■■■■□ 19.6
SMTN-219ENST00000493335 GOLGA3Q08378 1498 aa21.7■■□□□ 1.06
SMTN-219ENST00000493335 TOP2AP11388 1531 aaKnown RBP21.66■■□□□ 1.06
SMTN-219ENST00000493335 BCL11AQ9H165 835 aa21.65■■□□□ 1.06
SMTN-219ENST00000493335 CLIP1P30622 1438 aa21.63■■□□□ 1.05
SMTN-219ENST00000493335 EEA1Q15075 1411 aa21.62■■□□□ 1.05
SMTN-219ENST00000493335 SMARCA2P51531 1590 aa21.62■■□□□ 1.05
SMTN-219ENST00000493335 ITGAEP38570 1179 aa21.58■■□□□ 1.05
SMTN-219ENST00000493335 SUPT16HQ9Y5B9 1047 aaKnown RBP21.52■■□□□ 1.04
SMTN-219ENST00000493335 SMARCA4P51532 1647 aa21.52■■□□□ 1.03
SMTN-219ENST00000493335 CEP164Q9UPV0 1460 aa21.48■■□□□ 1.03
SMTN-219ENST00000493335 BCANQ96GW7 911 aa21.47■■□□□ 1.03
SMTN-219ENST00000493335 VPS8Q8N3P4 1428 aa21.46■■□□□ 1.03
SMTN-219ENST00000493335 UNC13AQ9UPW8 1703 aa21.41■■□□□ 1.02
SMTN-219ENST00000493335 RAPGEF2Q9Y4G8 1499 aa21.41■■□□□ 1.02
SMTN-219ENST00000493335 KANK4Q5T7N3 995 aaPredicted RBP21.38■■□□□ 1.01
SMTN-219ENST00000493335 KCNH8Q96L42 1107 aa21.38■■□□□ 1.01
SMTN-219ENST00000493335 DHX57Q6P158 1386 aaKnown RBP21.35■■□□□ 1.01
SMTN-219ENST00000493335 SYNJ1O43426 1573 aa21.31■■□□□ 1
SMTN-219ENST00000493335 TSHZ2Q9NRE2 1034 aa21.3■■□□□ 1
SMTN-219ENST00000493335 ANP32EQ9BTT0 268 aa21.28■■□□□ 1
SMTN-219ENST00000493335 KIF21BO75037 1637 aa21.24■□□□□ 0.99
SMTN-219ENST00000493335 BICRAQ9NZM4 1560 aa21.22■□□□□ 0.99
SMTN-219ENST00000493335 PRKCSHP14314 528 aaPredicted RBP21.22■□□□□ 0.99
SMTN-219ENST00000493335 DDX10Q13206 875 aaKnown RBP21.21■□□□□ 0.99
SMTN-219ENST00000493335 FKBP8Q14318 412 aa21.2■□□□□ 0.98
SMTN-219ENST00000493335 CLSPNQ9HAW4 1339 aa21.2■□□□□ 0.98
SMTN-219ENST00000493335 HIRIP3Q9BW71 556 aaPredicted RBP21.2■□□□□ 0.98
SMTN-219ENST00000493335 ATP1B4Q9UN42 357 aaPredicted RBP21.15■□□□□ 0.98
SMTN-219ENST00000493335 BAZ1BQ9UIG0 1483 aaKnown RBP21.13■□□□□ 0.97
SMTN-219ENST00000493335 TRIM52Q96A61 297 aa21.11■□□□□ 0.97
SMTN-219ENST00000493335 SIN3AQ96ST3 1273 aa21.09■□□□□ 0.97
SMTN-219ENST00000493335 FAM50AQ14320 339 aaKnown RBP21.08■□□□□ 0.97
SMTN-219ENST00000493335 NEFLP07196 543 aa21.07■□□□□ 0.96
SMTN-219ENST00000493335 CCNB3Q8WWL7 1395 aa21.06■□□□□ 0.96
SMTN-219ENST00000493335 ARAP1Q96P48 1450 aa21.03■□□□□ 0.96
SMTN-219ENST00000493335 RAB3GAP2Q9H2M9 1393 aa21.01■□□□□ 0.95
SMTN-219ENST00000493335 ATAD2BQ9ULI0 1458 aa20.99■□□□□ 0.95
SMTN-219ENST00000493335 P3H3Q8IVL6 736 aa20.99■□□□□ 0.95
SMTN-219ENST00000493335 RRBP1Q9P2E9 1410 aaKnown RBP20.92■□□□□ 0.94
SMTN-219ENST00000493335 ANP32CO43423 234 aa20.9■□□□□ 0.94
SMTN-219ENST00000493335 RBM19Q9Y4C8 960 aaKnown RBP20.89■□□□□ 0.94
SMTN-219ENST00000493335 PRXQ9BXM0 1461 aa20.89■□□□□ 0.93
SMTN-219ENST00000493335 IRX6P78412 446 aaPredicted RBP20.87■□□□□ 0.93
SMTN-219ENST00000493335 KIF27Q86VH2 1401 aa20.85■□□□□ 0.93
SMTN-219ENST00000493335 TOP2BQ02880 1626 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms