RNA–Protein interactions for RNA: ENST00000302313.9

WDR48-201, Transcript of WD repeat domain 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene WDR48, Length 3,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WDR48-201ENST00000302313 NISCHQ9Y2I1 1504 aa14.33□□□□□ -0.12
WDR48-201ENST00000302313 DCAF8L2P0C7V8 631 aa12.64□□□□□ -0.39
WDR48-201ENST00000302313 PELP1Q8IZL8 1130 aaKnown RBP12.52□□□□□ -0.41
WDR48-201ENST00000302313 CCDC180Q9P1Z9 1646 aa12.27□□□□□ -0.45
WDR48-201ENST00000302313 ABCC9O60706 1549 aa12.25□□□□□ -0.45
WDR48-201ENST00000302313 MYT1Q01538 1121 aa12.23□□□□□ -0.45
WDR48-201ENST00000302313 ZCCHC6Q5VYS8 1495 aaKnown RBP12.2□□□□□ -0.46
WDR48-201ENST00000302313 HRCP23327 699 aa12.16□□□□□ -0.46
WDR48-201ENST00000302313 SHROOM4Q9ULL8 1493 aa12□□□□□ -0.49
WDR48-201ENST00000302313 DCAF1Q9Y4B6 1507 aa11.91□□□□□ -0.5
WDR48-201ENST00000302313 MYO15BQ96JP2 1530 aa11.87□□□□□ -0.51
WDR48-201ENST00000302313 SUPT5HO00267 1087 aaKnown RBP11.85□□□□□ -0.51
WDR48-201ENST00000302313 CHIC1Q5VXU3 224 aa11.8□□□□□ -0.52
WDR48-201ENST00000302313 TTBK1Q5TCY1 1321 aaPredicted RBP11.79□□□□□ -0.52
WDR48-201ENST00000302313 SCAF1Q9H7N4 1312 aaKnown RBP11.72□□□□□ -0.53
WDR48-201ENST00000302313 PABPN1Q86U42 306 aaKnown RBP eCLIP11.68□□□□□ -0.543e-10■■■■□ 19.6
WDR48-201ENST00000302313 RB1CC1Q8TDY2 1594 aa11.66□□□□□ -0.54
WDR48-201ENST00000302313 NACADO15069 1562 aa11.63□□□□□ -0.55
WDR48-201ENST00000302313 PPARGC1BQ86YN6 1023 aaKnown RBP11.59□□□□□ -0.55
WDR48-201ENST00000302313 SCRIBQ14160 1630 aa11.57□□□□□ -0.56
WDR48-201ENST00000302313 PCGF6Q9BYE7 350 aa11.5□□□□□ -0.57
WDR48-201ENST00000302313 TRIM26Q12899 539 aaPredicted RBP11.39□□□□□ -0.59
WDR48-201ENST00000302313 RSF1Q96T23 1441 aaPredicted RBP11.35□□□□□ -0.59
WDR48-201ENST00000302313 LOC105371045A0A1W2PR82 267 aa11.33□□□□□ -0.6
WDR48-201ENST00000302313 ZEB1P37275 1124 aaPredicted RBP11.29□□□□□ -0.6
WDR48-201ENST00000302313 ACIN1Q9UKV3 1341 aaKnown RBP11.27□□□□□ -0.61
WDR48-201ENST00000302313 PRKCSHP14314 528 aaPredicted RBP11.22□□□□□ -0.61
WDR48-201ENST00000302313 EIF4G1Q04637 1599 aaKnown RBP11.18□□□□□ -0.62
WDR48-201ENST00000302313 BCL11AQ9H165 835 aa11.18□□□□□ -0.62
WDR48-201ENST00000302313 NEUROD1Q13562 356 aa11.14□□□□□ -0.63
WDR48-201ENST00000302313 APLP2Q06481 763 aa11.13□□□□□ -0.63
WDR48-201ENST00000302313 CECR2Q9BXF3 1484 aa11.12□□□□□ -0.63
WDR48-201ENST00000302313 BAZ1AQ9NRL2 1556 aaPredicted RBP11.12□□□□□ -0.63
WDR48-201ENST00000302313 FAM9AQ8IZU1 332 aaPredicted RBP11.11□□□□□ -0.63
WDR48-201ENST00000302313 TRIM41Q8WV44 630 aa11.11□□□□□ -0.63
WDR48-201ENST00000302313 MROH2BQ7Z745 1585 aa11.09□□□□□ -0.63
WDR48-201ENST00000302313 UNC13AQ9UPW8 1703 aa11.08□□□□□ -0.64
WDR48-201ENST00000302313 WIZO95785 1651 aa11.08□□□□□ -0.64
WDR48-201ENST00000302313 BICRAQ9NZM4 1560 aa11.07□□□□□ -0.64
WDR48-201ENST00000302313 GTF3C3Q9Y5Q9 886 aa11.04□□□□□ -0.64
WDR48-201ENST00000302313 CENPBP07199 599 aaPredicted RBP11.02□□□□□ -0.65
WDR48-201ENST00000302313 WRNQ14191 1432 aaPredicted RBP eCLIP10.99□□□□□ -0.651e-7■■■■■ 66.8
WDR48-201ENST00000302313 TOP2AP11388 1531 aaKnown RBP10.96□□□□□ -0.65
WDR48-201ENST00000302313 BAZ1BQ9UIG0 1483 aaKnown RBP10.94□□□□□ -0.66
WDR48-201ENST00000302313 ERICH6Q7L0X2 663 aa10.94□□□□□ -0.66
WDR48-201ENST00000302313 SMARCA4P51532 1647 aa10.91□□□□□ -0.66
WDR48-201ENST00000302313 ANP32EQ9BTT0 268 aa10.91□□□□□ -0.66
WDR48-201ENST00000302313 SMARCA2P51531 1590 aa10.9□□□□□ -0.67
WDR48-201ENST00000302313 DNAJC5BQ9UF47 199 aa10.88□□□□□ -0.67
WDR48-201ENST00000302313 ATAD2BQ9ULI0 1458 aa10.87□□□□□ -0.67
WDR48-201ENST00000302313 EEA1Q15075 1411 aa10.86□□□□□ -0.67
WDR48-201ENST00000302313 CC2D2AQ9P2K1 1620 aa10.83□□□□□ -0.68
WDR48-201ENST00000302313 TNIKQ9UKE5 1360 aa10.83□□□□□ -0.68
WDR48-201ENST00000302313 CCDC88BA6NC98 1476 aa10.83□□□□□ -0.68
WDR48-201ENST00000302313 ABCC8Q09428 1581 aa10.82□□□□□ -0.68
WDR48-201ENST00000302313 CEP162Q5TB80 1403 aa10.8□□□□□ -0.68
WDR48-201ENST00000302313 EHMT2Q96KQ7 1210 aa10.8□□□□□ -0.68
WDR48-201ENST00000302313 PEG3Q9GZU2 1588 aa10.79□□□□□ -0.68
WDR48-201ENST00000302313 KIF21BO75037 1637 aa10.77□□□□□ -0.69
WDR48-201ENST00000302313 NCAPD3P42695 1498 aa10.75□□□□□ -0.69
WDR48-201ENST00000302313 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.74□□□□□ -0.69
WDR48-201ENST00000302313 CCER1Q8TC90 406 aaPredicted RBP10.74□□□□□ -0.69
WDR48-201ENST00000302313 CLSPNQ9HAW4 1339 aa10.74□□□□□ -0.69
WDR48-201ENST00000302313 GOLGA3Q08378 1498 aa10.73□□□□□ -0.69
WDR48-201ENST00000302313 CSRNP3Q8WYN3 585 aa10.73□□□□□ -0.69
WDR48-201ENST00000302313 SOGA1O94964 1423 aa10.72□□□□□ -0.69
WDR48-201ENST00000302313 DIEXFQ68CQ4 756 aaKnown RBP10.71□□□□□ -0.69
WDR48-201ENST00000302313 RUSC2Q8N2Y8 1516 aa10.67□□□□□ -0.7
WDR48-201ENST00000302313 ERCC6Q03468 1493 aa10.66□□□□□ -0.7
WDR48-201ENST00000302313 CEP164Q9UPV0 1460 aa10.66□□□□□ -0.7
WDR48-201ENST00000302313 TSHZ2Q9NRE2 1034 aa10.66□□□□□ -0.7
WDR48-201ENST00000302313 HMGXB3Q12766 1538 aa10.65□□□□□ -0.7
WDR48-201ENST00000302313 SYNJ1O43426 1573 aa10.64□□□□□ -0.71
WDR48-201ENST00000302313 CADPSQ9ULU8 1353 aa10.63□□□□□ -0.71
WDR48-201ENST00000302313 ZNF316A6NFI3 1004 aaPredicted RBP10.63□□□□□ -0.71
WDR48-201ENST00000302313 VPS8Q8N3P4 1428 aa10.59□□□□□ -0.71
WDR48-201ENST00000302313 PDS5BQ9NTI5 1447 aa10.58□□□□□ -0.72
WDR48-201ENST00000302313 BIVM-ERCC5R4GMW8 1640 aa10.58□□□□□ -0.72
WDR48-201ENST00000302313 RANGAP1P46060 587 aaPredicted RBP10.57□□□□□ -0.72
WDR48-201ENST00000302313 NESP48681 1621 aa10.57□□□□□ -0.72
WDR48-201ENST00000302313 TOP2BQ02880 1626 aa10.56□□□□□ -0.72
WDR48-201ENST00000302313 ERICH3Q5RHP9 1530 aa10.55□□□□□ -0.72
WDR48-201ENST00000302313 CLIP1P30622 1438 aa10.54□□□□□ -0.72
WDR48-201ENST00000302313 SUPT16HQ9Y5B9 1047 aaKnown RBP10.53□□□□□ -0.72
WDR48-201ENST00000302313 UBTFP17480 764 aaKnown RBP10.52□□□□□ -0.73
WDR48-201ENST00000302313 FANCD2Q9BXW9 1451 aa10.51□□□□□ -0.73
WDR48-201ENST00000302313 FBLN2P98095 1184 aa10.5□□□□□ -0.73
WDR48-201ENST00000302313 RAPGEF2Q9Y4G8 1499 aa10.49□□□□□ -0.73
WDR48-201ENST00000302313 CUX2O14529 1486 aa10.48□□□□□ -0.73
WDR48-201ENST00000302313 UBE2Q2Q8WVN8 375 aa10.48□□□□□ -0.73
WDR48-201ENST00000302313 CFTRP13569 1480 aa10.48□□□□□ -0.73
WDR48-201ENST00000302313 PRXQ9BXM0 1461 aa10.46□□□□□ -0.74
WDR48-201ENST00000302313 MIER1Q8N108 512 aa10.44□□□□□ -0.74
WDR48-201ENST00000302313 ARAP1Q96P48 1450 aa10.44□□□□□ -0.74
WDR48-201ENST00000302313 RRBP1Q9P2E9 1410 aaKnown RBP10.42□□□□□ -0.74
WDR48-201ENST00000302313 PRDM2Q13029 1718 aa10.42□□□□□ -0.74
WDR48-201ENST00000302313 DHX57Q6P158 1386 aaKnown RBP10.41□□□□□ -0.74
WDR48-201ENST00000302313 LAMC3Q9Y6N6 1575 aa10.41□□□□□ -0.74
WDR48-201ENST00000302313 ERICH6BQ5W0A0 696 aa10.37□□□□□ -0.75
WDR48-201ENST00000302313 MAP3K1Q13233 1512 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms