Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
NHLRC1Q6VVB1 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NHLRC1Q6VVB1 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NHLRC1Q6VVB1 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.92■□□□□ 0.94
NHLRC1Q6VVB1 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.92■□□□□ 0.94
NHLRC1Q6VVB1 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NHLRC1Q6VVB1 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NHLRC1Q6VVB1 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NHLRC1Q6VVB1 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NHLRC1Q6VVB1 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NHLRC1Q6VVB1 TSPY13P-201ENST00000338964 914 ntBASIC20.91■□□□□ 0.94
NHLRC1Q6VVB1 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NHLRC1Q6VVB1 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NHLRC1Q6VVB1 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
NHLRC1Q6VVB1 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.91■□□□□ 0.94
NHLRC1Q6VVB1 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NHLRC1Q6VVB1 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NHLRC1Q6VVB1 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NHLRC1Q6VVB1 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NHLRC1Q6VVB1 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
NHLRC1Q6VVB1 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.9■□□□□ 0.94
NHLRC1Q6VVB1 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.9■□□□□ 0.94
NHLRC1Q6VVB1 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
NHLRC1Q6VVB1 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NHLRC1Q6VVB1 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NHLRC1Q6VVB1 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NHLRC1Q6VVB1 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.9■□□□□ 0.94
NHLRC1Q6VVB1 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
NHLRC1Q6VVB1 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NHLRC1Q6VVB1 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.9■□□□□ 0.94
NHLRC1Q6VVB1 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
NHLRC1Q6VVB1 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.9■□□□□ 0.94
NHLRC1Q6VVB1 PVT1_1.1-201ENST00000615125 194 ntBASIC20.9■□□□□ 0.94
NHLRC1Q6VVB1 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NHLRC1Q6VVB1 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NHLRC1Q6VVB1 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
NHLRC1Q6VVB1 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.89■□□□□ 0.94
NHLRC1Q6VVB1 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
NHLRC1Q6VVB1 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
NHLRC1Q6VVB1 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NHLRC1Q6VVB1 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.89■□□□□ 0.93
NHLRC1Q6VVB1 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NHLRC1Q6VVB1 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NHLRC1Q6VVB1 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.89■□□□□ 0.93
NHLRC1Q6VVB1 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NHLRC1Q6VVB1 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
NHLRC1Q6VVB1 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.89■□□□□ 0.93
NHLRC1Q6VVB1 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NHLRC1Q6VVB1 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NHLRC1Q6VVB1 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NHLRC1Q6VVB1 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NHLRC1Q6VVB1 AL592295.1-201ENST00000400984 884 ntBASIC20.88■□□□□ 0.93
NHLRC1Q6VVB1 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NHLRC1Q6VVB1 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
NHLRC1Q6VVB1 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.88■□□□□ 0.93
NHLRC1Q6VVB1 AC012354.3-201ENST00000623734 483 ntBASIC20.88■□□□□ 0.93
NHLRC1Q6VVB1 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NHLRC1Q6VVB1 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NHLRC1Q6VVB1 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NHLRC1Q6VVB1 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.88■□□□□ 0.93
NHLRC1Q6VVB1 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NHLRC1Q6VVB1 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NHLRC1Q6VVB1 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NHLRC1Q6VVB1 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NHLRC1Q6VVB1 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
NHLRC1Q6VVB1 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.87■□□□□ 0.93
NHLRC1Q6VVB1 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NHLRC1Q6VVB1 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.87■□□□□ 0.93
NHLRC1Q6VVB1 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
NHLRC1Q6VVB1 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.87■□□□□ 0.93
NHLRC1Q6VVB1 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NHLRC1Q6VVB1 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.86■□□□□ 0.93
NHLRC1Q6VVB1 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.86■□□□□ 0.93
NHLRC1Q6VVB1 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NHLRC1Q6VVB1 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NHLRC1Q6VVB1 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NHLRC1Q6VVB1 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.85■□□□□ 0.93
NHLRC1Q6VVB1 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.85■□□□□ 0.93
NHLRC1Q6VVB1 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NHLRC1Q6VVB1 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.85■□□□□ 0.93
NHLRC1Q6VVB1 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NHLRC1Q6VVB1 AC074183.2-201ENST00000623112 922 ntBASIC20.85■□□□□ 0.93
NHLRC1Q6VVB1 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NHLRC1Q6VVB1 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NHLRC1Q6VVB1 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NHLRC1Q6VVB1 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NHLRC1Q6VVB1 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.84■□□□□ 0.93
NHLRC1Q6VVB1 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.84■□□□□ 0.93
NHLRC1Q6VVB1 AL033527.3-201ENST00000566366 1196 ntBASIC20.84■□□□□ 0.93
NHLRC1Q6VVB1 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NHLRC1Q6VVB1 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.84■□□□□ 0.93
NHLRC1Q6VVB1 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NHLRC1Q6VVB1 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
NHLRC1Q6VVB1 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
NHLRC1Q6VVB1 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
NHLRC1Q6VVB1 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NHLRC1Q6VVB1 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.83■□□□□ 0.93
NHLRC1Q6VVB1 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.83■□□□□ 0.93
NHLRC1Q6VVB1 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NHLRC1Q6VVB1 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms