Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 AC108673.1-201ENST00000510422 1159 ntBASIC17.59■□□□□ 0.41
MRPL54Q6P161 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MRPL54Q6P161 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC17.59■□□□□ 0.41
MRPL54Q6P161 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
MRPL54Q6P161 AC233723.2-201ENST00000623798 2106 ntBASIC17.59■□□□□ 0.41
MRPL54Q6P161 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC17.58■□□□□ 0.41
MRPL54Q6P161 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
MRPL54Q6P161 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
MRPL54Q6P161 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
MRPL54Q6P161 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
MRPL54Q6P161 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
MRPL54Q6P161 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
MRPL54Q6P161 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
MRPL54Q6P161 EFS-203ENST00000429593 2610 ntTSL 2 BASIC17.57■□□□□ 0.4
MRPL54Q6P161 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MRPL54Q6P161 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MRPL54Q6P161 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MRPL54Q6P161 MIR762-201ENST00000390236 83 ntBASIC17.57■□□□□ 0.4
MRPL54Q6P161 CAHM-201ENST00000604200 896 ntBASIC17.57■□□□□ 0.4
MRPL54Q6P161 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
MRPL54Q6P161 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MRPL54Q6P161 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC17.56■□□□□ 0.4
MRPL54Q6P161 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC17.56■□□□□ 0.4
MRPL54Q6P161 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MRPL54Q6P161 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MRPL54Q6P161 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MRPL54Q6P161 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC17.56■□□□□ 0.4
MRPL54Q6P161 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
MRPL54Q6P161 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
MRPL54Q6P161 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC17.56■□□□□ 0.4
MRPL54Q6P161 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
MRPL54Q6P161 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
MRPL54Q6P161 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MRPL54Q6P161 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MRPL54Q6P161 USP48-205ENST00000421625 2818 ntTSL 2 BASIC17.55■□□□□ 0.4
MRPL54Q6P161 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MRPL54Q6P161 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MRPL54Q6P161 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
MRPL54Q6P161 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
MRPL54Q6P161 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC17.55■□□□□ 0.4
MRPL54Q6P161 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
MRPL54Q6P161 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MRPL54Q6P161 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MRPL54Q6P161 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MRPL54Q6P161 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC17.54■□□□□ 0.4
MRPL54Q6P161 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MRPL54Q6P161 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MRPL54Q6P161 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC17.54■□□□□ 0.4
MRPL54Q6P161 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
MRPL54Q6P161 MIR6090-201ENST00000622481 60 ntBASIC17.54■□□□□ 0.4
MRPL54Q6P161 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MRPL54Q6P161 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MRPL54Q6P161 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
MRPL54Q6P161 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC17.53■□□□□ 0.4
MRPL54Q6P161 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
MRPL54Q6P161 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MRPL54Q6P161 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
MRPL54Q6P161 CALM3-209ENST00000597743 577 ntTSL 4 BASIC17.53■□□□□ 0.4
MRPL54Q6P161 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
MRPL54Q6P161 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
MRPL54Q6P161 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC17.53■□□□□ 0.4
MRPL54Q6P161 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MRPL54Q6P161 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MRPL54Q6P161 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MRPL54Q6P161 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
MRPL54Q6P161 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
MRPL54Q6P161 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MRPL54Q6P161 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC17.52■□□□□ 0.4
MRPL54Q6P161 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
MRPL54Q6P161 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.4
MRPL54Q6P161 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
MRPL54Q6P161 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
MRPL54Q6P161 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
MRPL54Q6P161 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
MRPL54Q6P161 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MRPL54Q6P161 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MRPL54Q6P161 AL024507.2-201ENST00000606070 2574 ntBASIC17.51■□□□□ 0.39
MRPL54Q6P161 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MRPL54Q6P161 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MRPL54Q6P161 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
MRPL54Q6P161 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
MRPL54Q6P161 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC17.51■□□□□ 0.39
MRPL54Q6P161 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MRPL54Q6P161 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MRPL54Q6P161 SHD-204ENST00000599689 1729 ntTSL 5 BASIC17.51■□□□□ 0.39
MRPL54Q6P161 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC17.51■□□□□ 0.39
MRPL54Q6P161 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MRPL54Q6P161 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MRPL54Q6P161 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MRPL54Q6P161 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
MRPL54Q6P161 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MRPL54Q6P161 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MRPL54Q6P161 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
MRPL54Q6P161 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
MRPL54Q6P161 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
MRPL54Q6P161 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
MRPL54Q6P161 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MRPL54Q6P161 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC17.49■□□□□ 0.39
MRPL54Q6P161 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC17.49■□□□□ 0.39
MRPL54Q6P161 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms