Protein–RNA interactions for Protein: Q6NVV3

NIPAL1, Magnesium transporter NIPA3, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL1Q6NVV3 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC22.4■■□□□ 1.18
NIPAL1Q6NVV3 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
NIPAL1Q6NVV3 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
NIPAL1Q6NVV3 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
NIPAL1Q6NVV3 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
NIPAL1Q6NVV3 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC22.39■■□□□ 1.17
NIPAL1Q6NVV3 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC22.38■■□□□ 1.17
NIPAL1Q6NVV3 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC22.38■■□□□ 1.17
NIPAL1Q6NVV3 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
NIPAL1Q6NVV3 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
NIPAL1Q6NVV3 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
NIPAL1Q6NVV3 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
NIPAL1Q6NVV3 PVT1_1.1-201ENST00000615125 194 ntBASIC22.38■■□□□ 1.17
NIPAL1Q6NVV3 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
NIPAL1Q6NVV3 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
NIPAL1Q6NVV3 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC22.38■■□□□ 1.17
NIPAL1Q6NVV3 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
NIPAL1Q6NVV3 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC22.37■■□□□ 1.17
NIPAL1Q6NVV3 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
NIPAL1Q6NVV3 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC22.37■■□□□ 1.17
NIPAL1Q6NVV3 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
NIPAL1Q6NVV3 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
NIPAL1Q6NVV3 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
NIPAL1Q6NVV3 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
NIPAL1Q6NVV3 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
NIPAL1Q6NVV3 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC22.37■■□□□ 1.17
NIPAL1Q6NVV3 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
NIPAL1Q6NVV3 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
NIPAL1Q6NVV3 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC22.37■■□□□ 1.17
NIPAL1Q6NVV3 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
NIPAL1Q6NVV3 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC22.37■■□□□ 1.17
NIPAL1Q6NVV3 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC22.37■■□□□ 1.17
NIPAL1Q6NVV3 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
NIPAL1Q6NVV3 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
NIPAL1Q6NVV3 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
NIPAL1Q6NVV3 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
NIPAL1Q6NVV3 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
NIPAL1Q6NVV3 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
NIPAL1Q6NVV3 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
NIPAL1Q6NVV3 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
NIPAL1Q6NVV3 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
NIPAL1Q6NVV3 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
NIPAL1Q6NVV3 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
NIPAL1Q6NVV3 AC011551.1-201ENST00000614101 683 ntBASIC22.35■■□□□ 1.17
NIPAL1Q6NVV3 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
NIPAL1Q6NVV3 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
NIPAL1Q6NVV3 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
NIPAL1Q6NVV3 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC22.34■■□□□ 1.17
NIPAL1Q6NVV3 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC22.34■■□□□ 1.17
NIPAL1Q6NVV3 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
NIPAL1Q6NVV3 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
NIPAL1Q6NVV3 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
NIPAL1Q6NVV3 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
NIPAL1Q6NVV3 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC22.34■■□□□ 1.17
NIPAL1Q6NVV3 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
NIPAL1Q6NVV3 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
NIPAL1Q6NVV3 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
NIPAL1Q6NVV3 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC22.34■■□□□ 1.17
NIPAL1Q6NVV3 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC22.34■■□□□ 1.17
NIPAL1Q6NVV3 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
NIPAL1Q6NVV3 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
NIPAL1Q6NVV3 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
NIPAL1Q6NVV3 CLDN5-201ENST00000403084 2357 ntBASIC22.33■■□□□ 1.17
NIPAL1Q6NVV3 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC22.33■■□□□ 1.17
NIPAL1Q6NVV3 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC22.33■■□□□ 1.17
NIPAL1Q6NVV3 CEBPA-AS1-201ENST00000592982 2198 ntBASIC22.33■■□□□ 1.16
NIPAL1Q6NVV3 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC22.32■■□□□ 1.16
NIPAL1Q6NVV3 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
NIPAL1Q6NVV3 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
NIPAL1Q6NVV3 KRT18P24-201ENST00000344739 1156 ntBASIC22.32■■□□□ 1.16
NIPAL1Q6NVV3 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
NIPAL1Q6NVV3 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
NIPAL1Q6NVV3 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
NIPAL1Q6NVV3 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC22.32■■□□□ 1.16
NIPAL1Q6NVV3 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
NIPAL1Q6NVV3 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
NIPAL1Q6NVV3 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
NIPAL1Q6NVV3 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC22.31■■□□□ 1.16
NIPAL1Q6NVV3 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
NIPAL1Q6NVV3 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
NIPAL1Q6NVV3 AC079834.2-201ENST00000609776 1949 ntBASIC22.31■■□□□ 1.16
NIPAL1Q6NVV3 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
NIPAL1Q6NVV3 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC22.31■■□□□ 1.16
NIPAL1Q6NVV3 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
NIPAL1Q6NVV3 AC103834.1-201ENST00000520383 144 ntBASIC22.31■■□□□ 1.16
NIPAL1Q6NVV3 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC22.31■■□□□ 1.16
NIPAL1Q6NVV3 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
NIPAL1Q6NVV3 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
NIPAL1Q6NVV3 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC22.31■■□□□ 1.16
NIPAL1Q6NVV3 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
NIPAL1Q6NVV3 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC22.31■■□□□ 1.16
NIPAL1Q6NVV3 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
NIPAL1Q6NVV3 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
NIPAL1Q6NVV3 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
NIPAL1Q6NVV3 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
NIPAL1Q6NVV3 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
NIPAL1Q6NVV3 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
NIPAL1Q6NVV3 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
NIPAL1Q6NVV3 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC22.29■■□□□ 1.16
NIPAL1Q6NVV3 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC22.29■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms