Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
KRT40Q6A162 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
KRT40Q6A162 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC27.06■■□□□ 1.92
KRT40Q6A162 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
KRT40Q6A162 LINC01124-201ENST00000409786 2117 ntBASIC27.06■■□□□ 1.92
KRT40Q6A162 LONRF2P2-201ENST00000439212 571 ntBASIC27.06■■□□□ 1.92
KRT40Q6A162 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
KRT40Q6A162 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC27.06■■□□□ 1.92
KRT40Q6A162 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC27.06■■□□□ 1.92
KRT40Q6A162 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
KRT40Q6A162 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
KRT40Q6A162 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
KRT40Q6A162 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC27.05■■□□□ 1.92
KRT40Q6A162 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC27.05■■□□□ 1.92
KRT40Q6A162 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
KRT40Q6A162 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
KRT40Q6A162 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC27.04■■□□□ 1.92
KRT40Q6A162 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
KRT40Q6A162 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC27.04■■□□□ 1.92
KRT40Q6A162 THA1P-201ENST00000590384 1145 ntBASIC27.04■■□□□ 1.92
KRT40Q6A162 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
KRT40Q6A162 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
KRT40Q6A162 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
KRT40Q6A162 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
KRT40Q6A162 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
KRT40Q6A162 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC27.03■■□□□ 1.92
KRT40Q6A162 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC27.03■■□□□ 1.92
KRT40Q6A162 BHLHE23-202ENST00000612929 1109 ntBASIC27.03■■□□□ 1.92
KRT40Q6A162 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC27.03■■□□□ 1.92
KRT40Q6A162 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC27.02■■□□□ 1.92
KRT40Q6A162 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
KRT40Q6A162 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC27.02■■□□□ 1.92
KRT40Q6A162 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
KRT40Q6A162 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC27.02■■□□□ 1.92
KRT40Q6A162 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
KRT40Q6A162 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC27.02■■□□□ 1.92
KRT40Q6A162 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
KRT40Q6A162 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.92
KRT40Q6A162 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.92
KRT40Q6A162 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC27.01■■□□□ 1.92
KRT40Q6A162 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
KRT40Q6A162 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
KRT40Q6A162 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
KRT40Q6A162 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC27.01■■□□□ 1.91
KRT40Q6A162 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC27.01■■□□□ 1.91
KRT40Q6A162 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC27.01■■□□□ 1.91
KRT40Q6A162 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC27■■□□□ 1.91
KRT40Q6A162 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC27■■□□□ 1.91
KRT40Q6A162 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC27■■□□□ 1.91
KRT40Q6A162 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
KRT40Q6A162 TMEM202-AS1-202ENST00000565181 2325 ntBASIC27■■□□□ 1.91
KRT40Q6A162 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC27■■□□□ 1.91
KRT40Q6A162 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
KRT40Q6A162 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
KRT40Q6A162 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC26.99■■□□□ 1.91
KRT40Q6A162 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
KRT40Q6A162 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
KRT40Q6A162 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC26.98■■□□□ 1.91
KRT40Q6A162 HYI-210ENST00000486909 905 ntTSL 5 BASIC26.98■■□□□ 1.91
KRT40Q6A162 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC26.98■■□□□ 1.91
KRT40Q6A162 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC26.98■■□□□ 1.91
KRT40Q6A162 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
KRT40Q6A162 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
KRT40Q6A162 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC26.97■■□□□ 1.91
KRT40Q6A162 HLA-L-211ENST00000482052 1765 ntBASIC26.97■■□□□ 1.91
KRT40Q6A162 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
KRT40Q6A162 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
KRT40Q6A162 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC26.97■■□□□ 1.91
KRT40Q6A162 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC26.97■■□□□ 1.91
KRT40Q6A162 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC26.97■■□□□ 1.91
KRT40Q6A162 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
KRT40Q6A162 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC26.96■■□□□ 1.91
KRT40Q6A162 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC26.96■■□□□ 1.91
KRT40Q6A162 AC139795.1-202ENST00000500444 432 ntBASIC26.96■■□□□ 1.91
KRT40Q6A162 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
KRT40Q6A162 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC26.96■■□□□ 1.91
KRT40Q6A162 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC26.96■■□□□ 1.91
KRT40Q6A162 LINC00543-201ENST00000567234 1845 ntBASIC26.95■■□□□ 1.91
KRT40Q6A162 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC26.95■■□□□ 1.9
KRT40Q6A162 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
KRT40Q6A162 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC26.95■■□□□ 1.9
KRT40Q6A162 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC26.95■■□□□ 1.9
KRT40Q6A162 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC26.95■■□□□ 1.9
KRT40Q6A162 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
KRT40Q6A162 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
KRT40Q6A162 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
KRT40Q6A162 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC26.94■■□□□ 1.9
KRT40Q6A162 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
KRT40Q6A162 BEX3-202ENST00000372634 753 ntTSL 2 BASIC26.94■■□□□ 1.9
KRT40Q6A162 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
KRT40Q6A162 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC26.94■■□□□ 1.9
KRT40Q6A162 HES6-204ENST00000409182 863 ntTSL 2 BASIC26.94■■□□□ 1.9
KRT40Q6A162 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
KRT40Q6A162 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
KRT40Q6A162 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
KRT40Q6A162 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
KRT40Q6A162 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
KRT40Q6A162 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC26.94■■□□□ 1.9
KRT40Q6A162 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
KRT40Q6A162 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms