Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.73■■□□□ 1.07
HLA-DQA1Q5Y7H0 AC022211.4-201ENST00000625094 2161 ntBASIC21.72■■□□□ 1.07
HLA-DQA1Q5Y7H0 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
HLA-DQA1Q5Y7H0 AC090877.2-201ENST00000558441 1738 ntBASIC21.72■■□□□ 1.07
HLA-DQA1Q5Y7H0 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HLA-DQA1Q5Y7H0 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
HLA-DQA1Q5Y7H0 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
HLA-DQA1Q5Y7H0 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
HLA-DQA1Q5Y7H0 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HLA-DQA1Q5Y7H0 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.72■■□□□ 1.07
HLA-DQA1Q5Y7H0 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
HLA-DQA1Q5Y7H0 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HLA-DQA1Q5Y7H0 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HLA-DQA1Q5Y7H0 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
HLA-DQA1Q5Y7H0 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HLA-DQA1Q5Y7H0 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.71■■□□□ 1.07
HLA-DQA1Q5Y7H0 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.71■■□□□ 1.07
HLA-DQA1Q5Y7H0 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
HLA-DQA1Q5Y7H0 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
HLA-DQA1Q5Y7H0 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.7■■□□□ 1.06
HLA-DQA1Q5Y7H0 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.7■■□□□ 1.06
HLA-DQA1Q5Y7H0 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.7■■□□□ 1.06
HLA-DQA1Q5Y7H0 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
HLA-DQA1Q5Y7H0 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
HLA-DQA1Q5Y7H0 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HLA-DQA1Q5Y7H0 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.7■■□□□ 1.06
HLA-DQA1Q5Y7H0 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
HLA-DQA1Q5Y7H0 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HLA-DQA1Q5Y7H0 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.7■■□□□ 1.06
HLA-DQA1Q5Y7H0 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HLA-DQA1Q5Y7H0 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.69■■□□□ 1.06
HLA-DQA1Q5Y7H0 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.69■■□□□ 1.06
HLA-DQA1Q5Y7H0 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HLA-DQA1Q5Y7H0 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HLA-DQA1Q5Y7H0 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HLA-DQA1Q5Y7H0 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HLA-DQA1Q5Y7H0 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
HLA-DQA1Q5Y7H0 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
HLA-DQA1Q5Y7H0 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.69■■□□□ 1.06
HLA-DQA1Q5Y7H0 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.69■■□□□ 1.06
HLA-DQA1Q5Y7H0 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
HLA-DQA1Q5Y7H0 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
HLA-DQA1Q5Y7H0 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
HLA-DQA1Q5Y7H0 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.68■■□□□ 1.06
HLA-DQA1Q5Y7H0 MIR6089-201ENST00000616698 64 ntBASIC21.68■■□□□ 1.06
HLA-DQA1Q5Y7H0 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
HLA-DQA1Q5Y7H0 AC142381.3-201ENST00000568208 1670 ntBASIC21.68■■□□□ 1.06
HLA-DQA1Q5Y7H0 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
HLA-DQA1Q5Y7H0 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
HLA-DQA1Q5Y7H0 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HLA-DQA1Q5Y7H0 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
HLA-DQA1Q5Y7H0 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
HLA-DQA1Q5Y7H0 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
HLA-DQA1Q5Y7H0 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HLA-DQA1Q5Y7H0 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.67■■□□□ 1.06
HLA-DQA1Q5Y7H0 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
HLA-DQA1Q5Y7H0 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HLA-DQA1Q5Y7H0 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
HLA-DQA1Q5Y7H0 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HLA-DQA1Q5Y7H0 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HLA-DQA1Q5Y7H0 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.65■■□□□ 1.06
HLA-DQA1Q5Y7H0 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
HLA-DQA1Q5Y7H0 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HLA-DQA1Q5Y7H0 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.65■■□□□ 1.06
HLA-DQA1Q5Y7H0 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HLA-DQA1Q5Y7H0 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HLA-DQA1Q5Y7H0 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
HLA-DQA1Q5Y7H0 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
HLA-DQA1Q5Y7H0 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
HLA-DQA1Q5Y7H0 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.64■■□□□ 1.06
HLA-DQA1Q5Y7H0 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
HLA-DQA1Q5Y7H0 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
HLA-DQA1Q5Y7H0 AP003733.4-201ENST00000623785 1697 ntBASIC21.64■■□□□ 1.05
HLA-DQA1Q5Y7H0 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
HLA-DQA1Q5Y7H0 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.64■■□□□ 1.05
HLA-DQA1Q5Y7H0 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
HLA-DQA1Q5Y7H0 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HLA-DQA1Q5Y7H0 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.63■■□□□ 1.05
HLA-DQA1Q5Y7H0 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HLA-DQA1Q5Y7H0 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.63■■□□□ 1.05
HLA-DQA1Q5Y7H0 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
HLA-DQA1Q5Y7H0 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HLA-DQA1Q5Y7H0 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HLA-DQA1Q5Y7H0 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HLA-DQA1Q5Y7H0 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.63■■□□□ 1.05
HLA-DQA1Q5Y7H0 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.63■■□□□ 1.05
HLA-DQA1Q5Y7H0 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HLA-DQA1Q5Y7H0 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.63■■□□□ 1.05
HLA-DQA1Q5Y7H0 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.63■■□□□ 1.05
HLA-DQA1Q5Y7H0 MIR4281-201ENST00000580852 62 ntBASIC21.63■■□□□ 1.05
HLA-DQA1Q5Y7H0 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
HLA-DQA1Q5Y7H0 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.62■■□□□ 1.05
HLA-DQA1Q5Y7H0 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
HLA-DQA1Q5Y7H0 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
HLA-DQA1Q5Y7H0 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
HLA-DQA1Q5Y7H0 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
HLA-DQA1Q5Y7H0 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
HLA-DQA1Q5Y7H0 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
HLA-DQA1Q5Y7H0 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.61■■□□□ 1.05
HLA-DQA1Q5Y7H0 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms