Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC24.91■■□□□ 1.58
VARS2Q5ST30 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
VARS2Q5ST30 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC24.9■■□□□ 1.58
VARS2Q5ST30 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC24.9■■□□□ 1.58
VARS2Q5ST30 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC24.9■■□□□ 1.58
VARS2Q5ST30 AL117332.1-201ENST00000622628 974 ntBASIC24.9■■□□□ 1.58
VARS2Q5ST30 EXOG-217ENST00000630638 197 ntTSL 5 BASIC24.9■■□□□ 1.58
VARS2Q5ST30 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
VARS2Q5ST30 DUSP8P4-201ENST00000399538 1761 ntBASIC24.9■■□□□ 1.58
VARS2Q5ST30 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC24.89■■□□□ 1.58
VARS2Q5ST30 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
VARS2Q5ST30 PEMT-206ENST00000435340 960 ntTSL 5 BASIC24.89■■□□□ 1.58
VARS2Q5ST30 TRIR-202ENST00000588213 841 ntTSL 3 BASIC24.89■■□□□ 1.58
VARS2Q5ST30 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC24.89■■□□□ 1.57
VARS2Q5ST30 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
VARS2Q5ST30 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC24.88■■□□□ 1.57
VARS2Q5ST30 SRR-208ENST00000576848 588 ntTSL 4 BASIC24.88■■□□□ 1.57
VARS2Q5ST30 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC24.88■■□□□ 1.57
VARS2Q5ST30 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC24.88■■□□□ 1.57
VARS2Q5ST30 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
VARS2Q5ST30 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC24.87■■□□□ 1.57
VARS2Q5ST30 RPP21-222ENST00000433076 577 ntTSL 2 BASIC24.87■■□□□ 1.57
VARS2Q5ST30 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC24.87■■□□□ 1.57
VARS2Q5ST30 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC24.87■■□□□ 1.57
VARS2Q5ST30 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
VARS2Q5ST30 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC24.86■■□□□ 1.57
VARS2Q5ST30 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
VARS2Q5ST30 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC24.86■■□□□ 1.57
VARS2Q5ST30 AC091060.1-201ENST00000623524 1766 ntBASIC24.86■■□□□ 1.57
VARS2Q5ST30 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
VARS2Q5ST30 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
VARS2Q5ST30 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC24.86■■□□□ 1.57
VARS2Q5ST30 MIR3621-201ENST00000580529 85 ntBASIC24.86■■□□□ 1.57
VARS2Q5ST30 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
VARS2Q5ST30 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC24.85■■□□□ 1.57
VARS2Q5ST30 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
VARS2Q5ST30 AC131281.2-201ENST00000520478 145 ntBASIC24.85■■□□□ 1.57
VARS2Q5ST30 SNX5-217ENST00000606557 1087 ntBASIC24.85■■□□□ 1.57
VARS2Q5ST30 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
VARS2Q5ST30 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC24.85■■□□□ 1.57
VARS2Q5ST30 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC24.84■■□□□ 1.57
VARS2Q5ST30 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC24.84■■□□□ 1.57
VARS2Q5ST30 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
VARS2Q5ST30 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
VARS2Q5ST30 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
VARS2Q5ST30 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
VARS2Q5ST30 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC24.83■■□□□ 1.57
VARS2Q5ST30 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC24.83■■□□□ 1.57
VARS2Q5ST30 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
VARS2Q5ST30 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC24.83■■□□□ 1.57
VARS2Q5ST30 CD72-202ENST00000378430 585 ntTSL 3 BASIC24.83■■□□□ 1.57
VARS2Q5ST30 LBH-205ENST00000407930 756 ntTSL 2 BASIC24.83■■□□□ 1.57
VARS2Q5ST30 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
VARS2Q5ST30 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
VARS2Q5ST30 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
VARS2Q5ST30 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
VARS2Q5ST30 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC24.83■■□□□ 1.56
VARS2Q5ST30 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
VARS2Q5ST30 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC24.82■■□□□ 1.56
VARS2Q5ST30 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC24.82■■□□□ 1.56
VARS2Q5ST30 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
VARS2Q5ST30 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC24.82■■□□□ 1.56
VARS2Q5ST30 SLC6A10P-202ENST00000431994 2058 ntBASIC24.82■■□□□ 1.56
VARS2Q5ST30 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
VARS2Q5ST30 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
VARS2Q5ST30 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC24.81■■□□□ 1.56
VARS2Q5ST30 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC24.81■■□□□ 1.56
VARS2Q5ST30 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC24.81■■□□□ 1.56
VARS2Q5ST30 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC24.81■■□□□ 1.56
VARS2Q5ST30 AL356740.2-201ENST00000601559 647 ntBASIC24.81■■□□□ 1.56
VARS2Q5ST30 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC24.81■■□□□ 1.56
VARS2Q5ST30 AC145676.1-201ENST00000514988 2004 ntBASIC24.81■■□□□ 1.56
VARS2Q5ST30 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC24.81■■□□□ 1.56
VARS2Q5ST30 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
VARS2Q5ST30 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
VARS2Q5ST30 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC24.8■■□□□ 1.56
VARS2Q5ST30 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
VARS2Q5ST30 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
VARS2Q5ST30 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
VARS2Q5ST30 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC24.8■■□□□ 1.56
VARS2Q5ST30 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC24.8■■□□□ 1.56
VARS2Q5ST30 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC24.8■■□□□ 1.56
VARS2Q5ST30 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC24.8■■□□□ 1.56
VARS2Q5ST30 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
VARS2Q5ST30 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC24.79■■□□□ 1.56
VARS2Q5ST30 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC24.79■■□□□ 1.56
VARS2Q5ST30 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC24.79■■□□□ 1.56
VARS2Q5ST30 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC24.78■■□□□ 1.56
VARS2Q5ST30 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
VARS2Q5ST30 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
VARS2Q5ST30 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC24.78■■□□□ 1.56
VARS2Q5ST30 AK3-203ENST00000447596 705 ntTSL 2 BASIC24.78■■□□□ 1.56
VARS2Q5ST30 CLTA-206ENST00000466396 695 ntTSL 2 BASIC24.78■■□□□ 1.56
VARS2Q5ST30 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
VARS2Q5ST30 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
VARS2Q5ST30 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
VARS2Q5ST30 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC24.77■■□□□ 1.56
VARS2Q5ST30 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
VARS2Q5ST30 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC24.77■■□□□ 1.56
VARS2Q5ST30 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC24.77■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms