Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PRICKLE4Q2TBC4 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
PRICKLE4Q2TBC4 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.83■■□□□ 1.08
PRICKLE4Q2TBC4 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.82■■□□□ 1.08
PRICKLE4Q2TBC4 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
PRICKLE4Q2TBC4 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PRICKLE4Q2TBC4 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.82■■□□□ 1.08
PRICKLE4Q2TBC4 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
PRICKLE4Q2TBC4 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
PRICKLE4Q2TBC4 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.82■■□□□ 1.08
PRICKLE4Q2TBC4 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.82■■□□□ 1.08
PRICKLE4Q2TBC4 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PRICKLE4Q2TBC4 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.82■■□□□ 1.08
PRICKLE4Q2TBC4 AC011551.1-201ENST00000614101 683 ntBASIC21.82■■□□□ 1.08
PRICKLE4Q2TBC4 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.82■■□□□ 1.08
PRICKLE4Q2TBC4 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PRICKLE4Q2TBC4 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PRICKLE4Q2TBC4 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.81■■□□□ 1.08
PRICKLE4Q2TBC4 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PRICKLE4Q2TBC4 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PRICKLE4Q2TBC4 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PRICKLE4Q2TBC4 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.81■■□□□ 1.08
PRICKLE4Q2TBC4 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PRICKLE4Q2TBC4 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PRICKLE4Q2TBC4 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PRICKLE4Q2TBC4 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PRICKLE4Q2TBC4 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.8■■□□□ 1.08
PRICKLE4Q2TBC4 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.8■■□□□ 1.08
PRICKLE4Q2TBC4 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PRICKLE4Q2TBC4 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PRICKLE4Q2TBC4 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PRICKLE4Q2TBC4 KRT8P33-201ENST00000508125 1423 ntBASIC21.8■■□□□ 1.08
PRICKLE4Q2TBC4 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PRICKLE4Q2TBC4 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.79■■□□□ 1.08
PRICKLE4Q2TBC4 AC120024.1-201ENST00000562672 995 ntBASIC21.79■■□□□ 1.08
PRICKLE4Q2TBC4 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PRICKLE4Q2TBC4 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PRICKLE4Q2TBC4 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PRICKLE4Q2TBC4 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PRICKLE4Q2TBC4 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.79■■□□□ 1.08
PRICKLE4Q2TBC4 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PRICKLE4Q2TBC4 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.78■■□□□ 1.08
PRICKLE4Q2TBC4 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PRICKLE4Q2TBC4 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PRICKLE4Q2TBC4 KRT18P24-201ENST00000344739 1156 ntBASIC21.78■■□□□ 1.08
PRICKLE4Q2TBC4 YBX1P4-201ENST00000392794 808 ntBASIC21.78■■□□□ 1.08
PRICKLE4Q2TBC4 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.78■■□□□ 1.08
PRICKLE4Q2TBC4 HLA-L-211ENST00000482052 1765 ntBASIC21.78■■□□□ 1.08
PRICKLE4Q2TBC4 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.77■■□□□ 1.08
PRICKLE4Q2TBC4 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PRICKLE4Q2TBC4 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PRICKLE4Q2TBC4 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC21.77■■□□□ 1.08
PRICKLE4Q2TBC4 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PRICKLE4Q2TBC4 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PRICKLE4Q2TBC4 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.77■■□□□ 1.08
PRICKLE4Q2TBC4 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.77■■□□□ 1.07
PRICKLE4Q2TBC4 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.77■■□□□ 1.07
PRICKLE4Q2TBC4 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.76■■□□□ 1.07
PRICKLE4Q2TBC4 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PRICKLE4Q2TBC4 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PRICKLE4Q2TBC4 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PRICKLE4Q2TBC4 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.75■■□□□ 1.07
PRICKLE4Q2TBC4 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PRICKLE4Q2TBC4 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.75■■□□□ 1.07
PRICKLE4Q2TBC4 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PRICKLE4Q2TBC4 AC103724.3-201ENST00000564481 992 ntBASIC21.75■■□□□ 1.07
PRICKLE4Q2TBC4 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.75■■□□□ 1.07
PRICKLE4Q2TBC4 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PRICKLE4Q2TBC4 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PRICKLE4Q2TBC4 THA1P-201ENST00000590384 1145 ntBASIC21.74■■□□□ 1.07
PRICKLE4Q2TBC4 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
PRICKLE4Q2TBC4 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.74■■□□□ 1.07
PRICKLE4Q2TBC4 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PRICKLE4Q2TBC4 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
PRICKLE4Q2TBC4 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PRICKLE4Q2TBC4 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
PRICKLE4Q2TBC4 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.73■■□□□ 1.07
PRICKLE4Q2TBC4 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PRICKLE4Q2TBC4 LINC01124-201ENST00000409786 2117 ntBASIC21.73■■□□□ 1.07
PRICKLE4Q2TBC4 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
PRICKLE4Q2TBC4 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PRICKLE4Q2TBC4 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PRICKLE4Q2TBC4 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
PRICKLE4Q2TBC4 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRICKLE4Q2TBC4 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PRICKLE4Q2TBC4 AC135731.1-201ENST00000569415 2548 ntBASIC21.72■■□□□ 1.07
PRICKLE4Q2TBC4 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.72■■□□□ 1.07
PRICKLE4Q2TBC4 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.72■■□□□ 1.07
PRICKLE4Q2TBC4 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.72■■□□□ 1.07
PRICKLE4Q2TBC4 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.72■■□□□ 1.07
PRICKLE4Q2TBC4 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PRICKLE4Q2TBC4 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PRICKLE4Q2TBC4 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PRICKLE4Q2TBC4 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
PRICKLE4Q2TBC4 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PRICKLE4Q2TBC4 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.71■■□□□ 1.07
PRICKLE4Q2TBC4 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PRICKLE4Q2TBC4 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PRICKLE4Q2TBC4 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PRICKLE4Q2TBC4 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms