Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 DUX4L9-201ENST00000449051 1259 ntBASIC21.11■□□□□ 0.97
RPS4XP62701 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RPS4XP62701 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RPS4XP62701 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.1■□□□□ 0.97
RPS4XP62701 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RPS4XP62701 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RPS4XP62701 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RPS4XP62701 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
RPS4XP62701 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.09■□□□□ 0.97
RPS4XP62701 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.09■□□□□ 0.97
RPS4XP62701 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RPS4XP62701 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RPS4XP62701 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RPS4XP62701 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RPS4XP62701 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
RPS4XP62701 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RPS4XP62701 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RPS4XP62701 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.08■□□□□ 0.97
RPS4XP62701 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RPS4XP62701 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RPS4XP62701 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
RPS4XP62701 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.07■□□□□ 0.96
RPS4XP62701 RPS2P7-201ENST00000447334 885 ntBASIC21.07■□□□□ 0.96
RPS4XP62701 SPCS2P3-201ENST00000500401 656 ntBASIC21.07■□□□□ 0.96
RPS4XP62701 AC074183.2-201ENST00000623112 922 ntBASIC21.07■□□□□ 0.96
RPS4XP62701 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.07■□□□□ 0.96
RPS4XP62701 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.07■□□□□ 0.96
RPS4XP62701 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RPS4XP62701 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RPS4XP62701 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
RPS4XP62701 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
RPS4XP62701 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RPS4XP62701 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RPS4XP62701 AC139795.1-202ENST00000500444 432 ntBASIC21.06■□□□□ 0.96
RPS4XP62701 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
RPS4XP62701 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RPS4XP62701 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPS4XP62701 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RPS4XP62701 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPS4XP62701 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
RPS4XP62701 HLA-L-211ENST00000482052 1765 ntBASIC21.05■□□□□ 0.96
RPS4XP62701 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC21.05■□□□□ 0.96
RPS4XP62701 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPS4XP62701 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPS4XP62701 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.05■□□□□ 0.96
RPS4XP62701 MIR6765-201ENST00000614092 87 ntBASIC21.05■□□□□ 0.96
RPS4XP62701 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
RPS4XP62701 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RPS4XP62701 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
RPS4XP62701 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPS4XP62701 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RPS4XP62701 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.04■□□□□ 0.96
RPS4XP62701 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPS4XP62701 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.04■□□□□ 0.96
RPS4XP62701 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPS4XP62701 AC018755.3-202ENST00000596210 929 ntBASIC21.04■□□□□ 0.96
RPS4XP62701 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPS4XP62701 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPS4XP62701 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPS4XP62701 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPS4XP62701 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.04■□□□□ 0.96
RPS4XP62701 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RPS4XP62701 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.03■□□□□ 0.96
RPS4XP62701 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.03■□□□□ 0.96
RPS4XP62701 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC21.03■□□□□ 0.96
RPS4XP62701 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RPS4XP62701 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.03■□□□□ 0.96
RPS4XP62701 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RPS4XP62701 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RPS4XP62701 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RPS4XP62701 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RPS4XP62701 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RPS4XP62701 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RPS4XP62701 AC004812.2-201ENST00000611079 2094 ntBASIC21.02■□□□□ 0.96
RPS4XP62701 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.02■□□□□ 0.96
RPS4XP62701 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.02■□□□□ 0.96
RPS4XP62701 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
RPS4XP62701 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.02■□□□□ 0.96
RPS4XP62701 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
RPS4XP62701 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.95
RPS4XP62701 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
RPS4XP62701 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RPS4XP62701 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RPS4XP62701 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.01■□□□□ 0.95
RPS4XP62701 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.01■□□□□ 0.95
RPS4XP62701 AC087393.1-201ENST00000582896 145 ntBASIC21.01■□□□□ 0.95
RPS4XP62701 AC010980.1-201ENST00000587192 1142 ntBASIC21.01■□□□□ 0.95
RPS4XP62701 AL035685.1-201ENST00000636663 812 ntBASIC21.01■□□□□ 0.95
RPS4XP62701 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RPS4XP62701 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
RPS4XP62701 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
RPS4XP62701 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RPS4XP62701 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RPS4XP62701 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RPS4XP62701 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21■□□□□ 0.95
RPS4XP62701 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RPS4XP62701 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
RPS4XP62701 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
RPS4XP62701 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21■□□□□ 0.95
RPS4XP62701 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms