Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RNF144AP50876 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RNF144AP50876 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RNF144AP50876 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RNF144AP50876 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RNF144AP50876 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RNF144AP50876 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.58■■□□□ 1.05
RNF144AP50876 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RNF144AP50876 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RNF144AP50876 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RNF144AP50876 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RNF144AP50876 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RNF144AP50876 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
RNF144AP50876 TSPY13P-201ENST00000338964 914 ntBASIC21.58■■□□□ 1.05
RNF144AP50876 KRT18P10-201ENST00000388836 1287 ntBASIC21.58■■□□□ 1.05
RNF144AP50876 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RNF144AP50876 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RNF144AP50876 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC21.58■■□□□ 1.05
RNF144AP50876 AC012354.3-201ENST00000623734 483 ntBASIC21.58■■□□□ 1.05
RNF144AP50876 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RNF144AP50876 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RNF144AP50876 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RNF144AP50876 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RNF144AP50876 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
RNF144AP50876 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.58■■□□□ 1.04
RNF144AP50876 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF144AP50876 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF144AP50876 AP003733.4-201ENST00000623785 1697 ntBASIC21.57■■□□□ 1.04
RNF144AP50876 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF144AP50876 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF144AP50876 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
RNF144AP50876 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF144AP50876 GUK1-208ENST00000366728 842 ntTSL 2 BASIC21.57■■□□□ 1.04
RNF144AP50876 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.57■■□□□ 1.04
RNF144AP50876 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF144AP50876 AC010980.1-201ENST00000587192 1142 ntBASIC21.57■■□□□ 1.04
RNF144AP50876 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
RNF144AP50876 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.57■■□□□ 1.04
RNF144AP50876 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
RNF144AP50876 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.56■■□□□ 1.04
RNF144AP50876 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RNF144AP50876 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RNF144AP50876 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RNF144AP50876 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RNF144AP50876 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.56■■□□□ 1.04
RNF144AP50876 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RNF144AP50876 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RNF144AP50876 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.55■■□□□ 1.04
RNF144AP50876 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
RNF144AP50876 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.55■■□□□ 1.04
RNF144AP50876 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.55■■□□□ 1.04
RNF144AP50876 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RNF144AP50876 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
RNF144AP50876 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
RNF144AP50876 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RNF144AP50876 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.55■■□□□ 1.04
RNF144AP50876 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RNF144AP50876 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RNF144AP50876 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.54■■□□□ 1.04
RNF144AP50876 LONRF2P2-201ENST00000439212 571 ntBASIC21.54■■□□□ 1.04
RNF144AP50876 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.54■■□□□ 1.04
RNF144AP50876 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.54■■□□□ 1.04
RNF144AP50876 PVT1_1.1-201ENST00000615125 194 ntBASIC21.54■■□□□ 1.04
RNF144AP50876 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
RNF144AP50876 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RNF144AP50876 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
RNF144AP50876 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.53■■□□□ 1.04
RNF144AP50876 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.53■■□□□ 1.04
RNF144AP50876 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RNF144AP50876 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.53■■□□□ 1.04
RNF144AP50876 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RNF144AP50876 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RNF144AP50876 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RNF144AP50876 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RNF144AP50876 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.53■■□□□ 1.04
RNF144AP50876 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RNF144AP50876 HLA-L-211ENST00000482052 1765 ntBASIC21.52■■□□□ 1.04
RNF144AP50876 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
RNF144AP50876 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.52■■□□□ 1.04
RNF144AP50876 MIR6089-201ENST00000616698 64 ntBASIC21.52■■□□□ 1.04
RNF144AP50876 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
RNF144AP50876 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RNF144AP50876 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
RNF144AP50876 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
RNF144AP50876 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RNF144AP50876 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
RNF144AP50876 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RNF144AP50876 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RNF144AP50876 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
RNF144AP50876 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RNF144AP50876 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.51■■□□□ 1.03
RNF144AP50876 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RNF144AP50876 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.51■■□□□ 1.03
RNF144AP50876 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RNF144AP50876 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RNF144AP50876 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.5■■□□□ 1.03
RNF144AP50876 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.5■■□□□ 1.03
RNF144AP50876 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RNF144AP50876 KRT8P33-201ENST00000508125 1423 ntBASIC21.5■■□□□ 1.03
RNF144AP50876 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms