Protein–RNA interactions for Protein: P35542

SAA4, Serum amyloid A-4 protein, humanhuman

Predictions only

Length 130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA4P35542 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC18.92■□□□□ 0.62
SAA4P35542 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC18.92■□□□□ 0.62
SAA4P35542 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC18.92■□□□□ 0.62
SAA4P35542 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
SAA4P35542 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SAA4P35542 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SAA4P35542 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SAA4P35542 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC18.91■□□□□ 0.62
SAA4P35542 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SAA4P35542 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC18.91■□□□□ 0.62
SAA4P35542 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC18.91■□□□□ 0.62
SAA4P35542 UNC93B8-201ENST00000511903 705 ntBASIC18.91■□□□□ 0.62
SAA4P35542 AC092028.1-203ENST00000608262 953 ntBASIC18.91■□□□□ 0.62
SAA4P35542 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
SAA4P35542 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SAA4P35542 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC18.91■□□□□ 0.62
SAA4P35542 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SAA4P35542 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SAA4P35542 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SAA4P35542 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SAA4P35542 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC18.9■□□□□ 0.62
SAA4P35542 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
SAA4P35542 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC18.9■□□□□ 0.62
SAA4P35542 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC18.9■□□□□ 0.62
SAA4P35542 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC18.9■□□□□ 0.62
SAA4P35542 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC18.9■□□□□ 0.62
SAA4P35542 GRAMD4P7-201ENST00000578182 1232 ntBASIC18.9■□□□□ 0.62
SAA4P35542 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SAA4P35542 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
SAA4P35542 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SAA4P35542 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
SAA4P35542 TK2-202ENST00000417693 1046 ntTSL 2 BASIC18.89■□□□□ 0.61
SAA4P35542 SENP5-202ENST00000419026 973 ntTSL 3 BASIC18.89■□□□□ 0.61
SAA4P35542 KRT16P3-201ENST00000439127 1283 ntBASIC18.89■□□□□ 0.61
SAA4P35542 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC18.89■□□□□ 0.61
SAA4P35542 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
SAA4P35542 AC131212.1-201ENST00000613771 668 ntBASIC18.89■□□□□ 0.61
SAA4P35542 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SAA4P35542 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
SAA4P35542 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SAA4P35542 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SAA4P35542 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SAA4P35542 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SAA4P35542 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SAA4P35542 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SAA4P35542 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SAA4P35542 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SAA4P35542 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SAA4P35542 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SAA4P35542 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SAA4P35542 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SAA4P35542 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SAA4P35542 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SAA4P35542 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
SAA4P35542 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SAA4P35542 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC18.87■□□□□ 0.61
SAA4P35542 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC18.87■□□□□ 0.61
SAA4P35542 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SAA4P35542 MIR6089-201ENST00000616698 64 ntBASIC18.87■□□□□ 0.61
SAA4P35542 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC18.86■□□□□ 0.61
SAA4P35542 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SAA4P35542 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SAA4P35542 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
SAA4P35542 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC18.86■□□□□ 0.61
SAA4P35542 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC18.86■□□□□ 0.61
SAA4P35542 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC18.86■□□□□ 0.61
SAA4P35542 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SAA4P35542 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SAA4P35542 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
SAA4P35542 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC18.85■□□□□ 0.61
SAA4P35542 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SAA4P35542 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
SAA4P35542 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SAA4P35542 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SAA4P35542 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SAA4P35542 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
SAA4P35542 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SAA4P35542 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SAA4P35542 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC18.84■□□□□ 0.61
SAA4P35542 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC18.84■□□□□ 0.61
SAA4P35542 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SAA4P35542 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SAA4P35542 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SAA4P35542 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC18.84■□□□□ 0.61
SAA4P35542 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC18.84■□□□□ 0.61
SAA4P35542 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC18.84■□□□□ 0.61
SAA4P35542 MTDHP2-201ENST00000601468 714 ntBASIC18.84■□□□□ 0.61
SAA4P35542 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC18.84■□□□□ 0.61
SAA4P35542 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SAA4P35542 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SAA4P35542 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SAA4P35542 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SAA4P35542 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SAA4P35542 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC18.83■□□□□ 0.61
SAA4P35542 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
SAA4P35542 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC18.83■□□□□ 0.6
SAA4P35542 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
SAA4P35542 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
SAA4P35542 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SAA4P35542 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms