Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
CSB-PGBD3P0DP91 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC31.3■■■□□ 2.6
CSB-PGBD3P0DP91 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC31.3■■■□□ 2.6
CSB-PGBD3P0DP91 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
CSB-PGBD3P0DP91 AC142086.6-201ENST00000621154 1765 ntBASIC31.29■■■□□ 2.6
CSB-PGBD3P0DP91 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
CSB-PGBD3P0DP91 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
CSB-PGBD3P0DP91 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC31.28■■■□□ 2.6
CSB-PGBD3P0DP91 AC026271.2-201ENST00000428091 497 ntBASIC31.28■■■□□ 2.6
CSB-PGBD3P0DP91 AC024257.2-201ENST00000549699 147 ntBASIC31.28■■■□□ 2.6
CSB-PGBD3P0DP91 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC31.28■■■□□ 2.6
CSB-PGBD3P0DP91 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC31.28■■■□□ 2.6
CSB-PGBD3P0DP91 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC31.28■■■□□ 2.6
CSB-PGBD3P0DP91 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC31.28■■■□□ 2.6
CSB-PGBD3P0DP91 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC31.27■■■□□ 2.6
CSB-PGBD3P0DP91 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC31.27■■■□□ 2.6
CSB-PGBD3P0DP91 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC31.26■■■□□ 2.6
CSB-PGBD3P0DP91 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC31.26■■■□□ 2.6
CSB-PGBD3P0DP91 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC31.26■■■□□ 2.59
CSB-PGBD3P0DP91 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC31.26■■■□□ 2.59
CSB-PGBD3P0DP91 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
CSB-PGBD3P0DP91 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC31.26■■■□□ 2.59
CSB-PGBD3P0DP91 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC31.26■■■□□ 2.59
CSB-PGBD3P0DP91 HYI-206ENST00000372434 1025 ntTSL 5 BASIC31.25■■■□□ 2.59
CSB-PGBD3P0DP91 LBH-205ENST00000407930 756 ntTSL 2 BASIC31.25■■■□□ 2.59
CSB-PGBD3P0DP91 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC31.25■■■□□ 2.59
CSB-PGBD3P0DP91 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC31.25■■■□□ 2.59
CSB-PGBD3P0DP91 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
CSB-PGBD3P0DP91 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC31.24■■■□□ 2.59
CSB-PGBD3P0DP91 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
CSB-PGBD3P0DP91 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC31.24■■■□□ 2.59
CSB-PGBD3P0DP91 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
CSB-PGBD3P0DP91 EDA-201ENST00000338901 1233 ntBASIC31.23■■■□□ 2.59
CSB-PGBD3P0DP91 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
CSB-PGBD3P0DP91 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC31.23■■■□□ 2.59
CSB-PGBD3P0DP91 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC31.23■■■□□ 2.59
CSB-PGBD3P0DP91 AL355001.2-201ENST00000620617 1191 ntBASIC31.23■■■□□ 2.59
CSB-PGBD3P0DP91 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC31.23■■■□□ 2.59
CSB-PGBD3P0DP91 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
CSB-PGBD3P0DP91 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC31.22■■■□□ 2.59
CSB-PGBD3P0DP91 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC31.22■■■□□ 2.59
CSB-PGBD3P0DP91 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
CSB-PGBD3P0DP91 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
CSB-PGBD3P0DP91 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC31.22■■■□□ 2.59
CSB-PGBD3P0DP91 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC31.22■■■□□ 2.59
CSB-PGBD3P0DP91 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
CSB-PGBD3P0DP91 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
CSB-PGBD3P0DP91 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC31.21■■■□□ 2.59
CSB-PGBD3P0DP91 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC31.21■■■□□ 2.59
CSB-PGBD3P0DP91 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC31.21■■■□□ 2.59
CSB-PGBD3P0DP91 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC31.2■■■□□ 2.59
CSB-PGBD3P0DP91 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
CSB-PGBD3P0DP91 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC31.2■■■□□ 2.59
CSB-PGBD3P0DP91 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC31.2■■■□□ 2.58
CSB-PGBD3P0DP91 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
CSB-PGBD3P0DP91 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC31.19■■■□□ 2.58
CSB-PGBD3P0DP91 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
CSB-PGBD3P0DP91 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC31.18■■■□□ 2.58
CSB-PGBD3P0DP91 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC31.18■■■□□ 2.58
CSB-PGBD3P0DP91 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC31.18■■■□□ 2.58
CSB-PGBD3P0DP91 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
CSB-PGBD3P0DP91 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
CSB-PGBD3P0DP91 AC105265.2-201ENST00000467189 838 ntBASIC31.18■■■□□ 2.58
CSB-PGBD3P0DP91 MIR5787-201ENST00000611784 55 ntBASIC31.18■■■□□ 2.58
CSB-PGBD3P0DP91 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
CSB-PGBD3P0DP91 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC31.18■■■□□ 2.58
CSB-PGBD3P0DP91 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC31.17■■■□□ 2.58
CSB-PGBD3P0DP91 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC31.17■■■□□ 2.58
CSB-PGBD3P0DP91 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC31.17■■■□□ 2.58
CSB-PGBD3P0DP91 GATM-206ENST00000558336 1522 ntTSL 2 BASIC31.17■■■□□ 2.58
CSB-PGBD3P0DP91 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC31.17■■■□□ 2.58
CSB-PGBD3P0DP91 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
CSB-PGBD3P0DP91 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC31.16■■■□□ 2.58
CSB-PGBD3P0DP91 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC31.16■■■□□ 2.58
CSB-PGBD3P0DP91 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
CSB-PGBD3P0DP91 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
CSB-PGBD3P0DP91 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
CSB-PGBD3P0DP91 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC31.16■■■□□ 2.58
CSB-PGBD3P0DP91 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
CSB-PGBD3P0DP91 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC31.15■■■□□ 2.58
CSB-PGBD3P0DP91 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC31.15■■■□□ 2.58
CSB-PGBD3P0DP91 GRAMD4P4-201ENST00000613563 1115 ntBASIC31.15■■■□□ 2.58
CSB-PGBD3P0DP91 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
CSB-PGBD3P0DP91 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC31.14■■■□□ 2.58
CSB-PGBD3P0DP91 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
CSB-PGBD3P0DP91 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC31.14■■■□□ 2.58
CSB-PGBD3P0DP91 AF213884.3-201ENST00000563833 479 ntBASIC31.14■■■□□ 2.58
CSB-PGBD3P0DP91 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC31.14■■■□□ 2.58
CSB-PGBD3P0DP91 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
CSB-PGBD3P0DP91 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
CSB-PGBD3P0DP91 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC31.13■■■□□ 2.57
CSB-PGBD3P0DP91 AC104564.3-201ENST00000582367 638 ntBASIC31.13■■■□□ 2.57
CSB-PGBD3P0DP91 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC31.13■■■□□ 2.57
CSB-PGBD3P0DP91 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
CSB-PGBD3P0DP91 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
CSB-PGBD3P0DP91 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
CSB-PGBD3P0DP91 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
CSB-PGBD3P0DP91 AC097639.1-201ENST00000565519 1891 ntBASIC31.12■■■□□ 2.57
CSB-PGBD3P0DP91 AL136967.2-201ENST00000623968 743 ntBASIC31.12■■■□□ 2.57
CSB-PGBD3P0DP91 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms