Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
COL5A2P05997 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
COL5A2P05997 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
COL5A2P05997 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC31.33■■■□□ 2.61
COL5A2P05997 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
COL5A2P05997 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
COL5A2P05997 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
COL5A2P05997 HYI-206ENST00000372434 1025 ntTSL 5 BASIC31.33■■■□□ 2.61
COL5A2P05997 GRAMD4P4-201ENST00000613563 1115 ntBASIC31.33■■■□□ 2.61
COL5A2P05997 ANKRD20A6P-201ENST00000618763 204 ntBASIC31.33■■■□□ 2.61
COL5A2P05997 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC31.33■■■□□ 2.61
COL5A2P05997 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
COL5A2P05997 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
COL5A2P05997 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
COL5A2P05997 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC31.32■■■□□ 2.6
COL5A2P05997 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
COL5A2P05997 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
COL5A2P05997 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC31.31■■■□□ 2.6
COL5A2P05997 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC31.31■■■□□ 2.6
COL5A2P05997 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
COL5A2P05997 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
COL5A2P05997 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
COL5A2P05997 LBH-205ENST00000407930 756 ntTSL 2 BASIC31.3■■■□□ 2.6
COL5A2P05997 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC31.3■■■□□ 2.6
COL5A2P05997 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
COL5A2P05997 SHF-208ENST00000560734 1731 ntTSL 3 BASIC31.3■■■□□ 2.6
COL5A2P05997 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC31.3■■■□□ 2.6
COL5A2P05997 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
COL5A2P05997 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC31.29■■■□□ 2.6
COL5A2P05997 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC31.29■■■□□ 2.6
COL5A2P05997 MIR6821-201ENST00000617625 74 ntBASIC31.29■■■□□ 2.6
COL5A2P05997 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
COL5A2P05997 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
COL5A2P05997 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
COL5A2P05997 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC31.29■■■□□ 2.6
COL5A2P05997 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC31.29■■■□□ 2.6
COL5A2P05997 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
COL5A2P05997 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
COL5A2P05997 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC31.28■■■□□ 2.6
COL5A2P05997 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
COL5A2P05997 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
COL5A2P05997 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC31.28■■■□□ 2.6
COL5A2P05997 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
COL5A2P05997 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC31.27■■■□□ 2.6
COL5A2P05997 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC31.27■■■□□ 2.6
COL5A2P05997 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC31.27■■■□□ 2.6
COL5A2P05997 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC31.27■■■□□ 2.6
COL5A2P05997 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
COL5A2P05997 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC31.26■■■□□ 2.6
COL5A2P05997 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
COL5A2P05997 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC31.26■■■□□ 2.59
COL5A2P05997 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
COL5A2P05997 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
COL5A2P05997 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
COL5A2P05997 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC31.26■■■□□ 2.59
COL5A2P05997 SF1-220ENST00000626028 704 ntTSL 2 BASIC31.26■■■□□ 2.59
COL5A2P05997 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC31.25■■■□□ 2.59
COL5A2P05997 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC31.24■■■□□ 2.59
COL5A2P05997 AC097381.1-201ENST00000429019 1296 ntBASIC31.24■■■□□ 2.59
COL5A2P05997 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC31.24■■■□□ 2.59
COL5A2P05997 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC31.23■■■□□ 2.59
COL5A2P05997 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
COL5A2P05997 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
COL5A2P05997 AC091305.1-201ENST00000479476 895 ntBASIC31.22■■■□□ 2.59
COL5A2P05997 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC31.21■■■□□ 2.59
COL5A2P05997 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
COL5A2P05997 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
COL5A2P05997 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC31.21■■■□□ 2.59
COL5A2P05997 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC31.21■■■□□ 2.59
COL5A2P05997 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
COL5A2P05997 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC31.21■■■□□ 2.59
COL5A2P05997 STOX2-205ENST00000513034 807 ntTSL 3 BASIC31.21■■■□□ 2.59
COL5A2P05997 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
COL5A2P05997 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC31.2■■■□□ 2.58
COL5A2P05997 MIR4767-201ENST00000582827 78 ntBASIC31.2■■■□□ 2.58
COL5A2P05997 RBM38-205ENST00000440234 686 ntTSL 2 BASIC31.19■■■□□ 2.58
COL5A2P05997 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC31.19■■■□□ 2.58
COL5A2P05997 AC004448.1-201ENST00000458332 883 ntBASIC31.19■■■□□ 2.58
COL5A2P05997 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC31.19■■■□□ 2.58
COL5A2P05997 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
COL5A2P05997 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC31.19■■■□□ 2.58
COL5A2P05997 AC087623.3-201ENST00000607047 1098 ntBASIC31.19■■■□□ 2.58
COL5A2P05997 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
COL5A2P05997 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC31.18■■■□□ 2.58
COL5A2P05997 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC31.18■■■□□ 2.58
COL5A2P05997 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
COL5A2P05997 DUX4L19-201ENST00000557448 1267 ntBASIC31.18■■■□□ 2.58
COL5A2P05997 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC31.17■■■□□ 2.58
COL5A2P05997 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC31.17■■■□□ 2.58
COL5A2P05997 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC31.17■■■□□ 2.58
COL5A2P05997 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
COL5A2P05997 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
COL5A2P05997 PARL-206ENST00000435888 1098 ntTSL 5 BASIC31.16■■■□□ 2.58
COL5A2P05997 AL162430.1-201ENST00000480705 870 ntBASIC31.16■■■□□ 2.58
COL5A2P05997 PLD4-205ENST00000553861 667 ntTSL 2 BASIC31.16■■■□□ 2.58
COL5A2P05997 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC31.16■■■□□ 2.58
COL5A2P05997 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
COL5A2P05997 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC31.15■■■□□ 2.58
COL5A2P05997 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
COL5A2P05997 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms