Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC28.27■■■□□ 2.12
CHGBP05060 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC28.27■■■□□ 2.12
CHGBP05060 MIR4281-201ENST00000580852 62 ntBASIC28.27■■■□□ 2.12
CHGBP05060 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
CHGBP05060 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
CHGBP05060 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC28.26■■■□□ 2.11
CHGBP05060 AC090877.2-201ENST00000558441 1738 ntBASIC28.26■■■□□ 2.11
CHGBP05060 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
CHGBP05060 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC28.25■■■□□ 2.11
CHGBP05060 GAK-223ENST00000628912 497 ntTSL 5 BASIC28.25■■■□□ 2.11
CHGBP05060 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
CHGBP05060 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
CHGBP05060 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC28.25■■■□□ 2.11
CHGBP05060 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
CHGBP05060 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
CHGBP05060 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC28.24■■■□□ 2.11
CHGBP05060 AC135731.1-201ENST00000569415 2548 ntBASIC28.24■■■□□ 2.11
CHGBP05060 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
CHGBP05060 LSR-205ENST00000427250 1606 ntTSL 2 BASIC28.23■■■□□ 2.11
CHGBP05060 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC28.23■■■□□ 2.11
CHGBP05060 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
CHGBP05060 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
CHGBP05060 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
CHGBP05060 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
CHGBP05060 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC28.22■■■□□ 2.11
CHGBP05060 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
CHGBP05060 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC28.22■■■□□ 2.11
CHGBP05060 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC28.22■■■□□ 2.11
CHGBP05060 RNF146-205ENST00000477776 762 ntTSL 3 BASIC28.22■■■□□ 2.11
CHGBP05060 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
CHGBP05060 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
CHGBP05060 AF131216.4-201ENST00000638924 1588 ntBASIC28.21■■■□□ 2.11
CHGBP05060 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC28.2■■■□□ 2.11
CHGBP05060 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC28.2■■■□□ 2.1
CHGBP05060 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC28.2■■■□□ 2.1
CHGBP05060 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC28.2■■■□□ 2.1
CHGBP05060 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC28.2■■■□□ 2.1
CHGBP05060 MIR6089-201ENST00000616698 64 ntBASIC28.2■■■□□ 2.1
CHGBP05060 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC28.2■■■□□ 2.1
CHGBP05060 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC28.2■■■□□ 2.1
CHGBP05060 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC28.2■■■□□ 2.1
CHGBP05060 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
CHGBP05060 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
CHGBP05060 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC28.2■■■□□ 2.1
CHGBP05060 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
CHGBP05060 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC28.19■■■□□ 2.1
CHGBP05060 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC28.19■■■□□ 2.1
CHGBP05060 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
CHGBP05060 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC28.19■■■□□ 2.1
CHGBP05060 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC28.19■■■□□ 2.1
CHGBP05060 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
CHGBP05060 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
CHGBP05060 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
CHGBP05060 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC28.18■■■□□ 2.1
CHGBP05060 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC28.18■■■□□ 2.1
CHGBP05060 SSSCA1-AS1-201ENST00000567594 614 ntBASIC28.18■■■□□ 2.1
CHGBP05060 AC011551.1-201ENST00000614101 683 ntBASIC28.18■■■□□ 2.1
CHGBP05060 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC28.18■■■□□ 2.1
CHGBP05060 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
CHGBP05060 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
CHGBP05060 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
CHGBP05060 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC28.17■■■□□ 2.1
CHGBP05060 TMEM202-AS1-202ENST00000565181 2325 ntBASIC28.17■■■□□ 2.1
CHGBP05060 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
CHGBP05060 AC239859.2-201ENST00000444165 318 ntBASIC28.16■■■□□ 2.1
CHGBP05060 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC28.16■■■□□ 2.1
CHGBP05060 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC28.16■■■□□ 2.1
CHGBP05060 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
CHGBP05060 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
CHGBP05060 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC28.15■■■□□ 2.1
CHGBP05060 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC28.15■■■□□ 2.1
CHGBP05060 OR2A1-AS1-204ENST00000470435 602 ntBASIC28.15■■■□□ 2.1
CHGBP05060 AC142381.3-201ENST00000568208 1670 ntBASIC28.15■■■□□ 2.1
CHGBP05060 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC28.15■■■□□ 2.1
CHGBP05060 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
CHGBP05060 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC28.14■■■□□ 2.1
CHGBP05060 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC28.14■■■□□ 2.1
CHGBP05060 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC28.14■■■□□ 2.1
CHGBP05060 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
CHGBP05060 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
CHGBP05060 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC28.14■■■□□ 2.1
CHGBP05060 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
CHGBP05060 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC28.13■■■□□ 2.09
CHGBP05060 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
CHGBP05060 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC28.13■■■□□ 2.09
CHGBP05060 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC28.13■■■□□ 2.09
CHGBP05060 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
CHGBP05060 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC28.13■■■□□ 2.09
CHGBP05060 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
CHGBP05060 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
CHGBP05060 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
CHGBP05060 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
CHGBP05060 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
CHGBP05060 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
CHGBP05060 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
CHGBP05060 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC28.12■■■□□ 2.09
CHGBP05060 AC137630.3-201ENST00000607245 391 ntBASIC28.12■■■□□ 2.09
CHGBP05060 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
CHGBP05060 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
CHGBP05060 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms