Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CD74P04233 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19.65■□□□□ 0.74
CD74P04233 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
CD74P04233 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.65■□□□□ 0.74
CD74P04233 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CD74P04233 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CD74P04233 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
CD74P04233 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC19.64■□□□□ 0.73
CD74P04233 HLA-V-202ENST00000446817 847 ntBASIC19.64■□□□□ 0.73
CD74P04233 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CD74P04233 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CD74P04233 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC19.64■□□□□ 0.73
CD74P04233 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CD74P04233 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CD74P04233 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.64■□□□□ 0.73
CD74P04233 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CD74P04233 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.63■□□□□ 0.73
CD74P04233 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CD74P04233 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CD74P04233 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CD74P04233 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CD74P04233 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CD74P04233 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CD74P04233 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CD74P04233 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CD74P04233 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CD74P04233 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CD74P04233 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC19.62■□□□□ 0.73
CD74P04233 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CD74P04233 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CD74P04233 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CD74P04233 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CD74P04233 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CD74P04233 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CD74P04233 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CD74P04233 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CD74P04233 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC19.61■□□□□ 0.73
CD74P04233 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC19.61■□□□□ 0.73
CD74P04233 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CD74P04233 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC19.61■□□□□ 0.73
CD74P04233 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CD74P04233 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.61■□□□□ 0.73
CD74P04233 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CD74P04233 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CD74P04233 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CD74P04233 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CD74P04233 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CD74P04233 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CD74P04233 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CD74P04233 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CD74P04233 AC233723.2-201ENST00000623798 2106 ntBASIC19.6■□□□□ 0.73
CD74P04233 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
CD74P04233 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CD74P04233 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CD74P04233 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CD74P04233 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CD74P04233 AC126177.7-201ENST00000547904 679 ntBASIC19.59■□□□□ 0.73
CD74P04233 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CD74P04233 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.58■□□□□ 0.73
CD74P04233 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CD74P04233 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
CD74P04233 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.58■□□□□ 0.73
CD74P04233 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.58■□□□□ 0.73
CD74P04233 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CD74P04233 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.58■□□□□ 0.73
CD74P04233 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CD74P04233 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CD74P04233 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC19.58■□□□□ 0.72
CD74P04233 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CD74P04233 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
CD74P04233 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CD74P04233 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CD74P04233 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
CD74P04233 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CD74P04233 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.57■□□□□ 0.72
CD74P04233 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.57■□□□□ 0.72
CD74P04233 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC19.57■□□□□ 0.72
CD74P04233 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC19.57■□□□□ 0.72
CD74P04233 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
CD74P04233 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CD74P04233 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
CD74P04233 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CD74P04233 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CD74P04233 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
CD74P04233 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
CD74P04233 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CD74P04233 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CD74P04233 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CD74P04233 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CD74P04233 HGH1-207ENST00000628266 258 ntTSL 5 BASIC19.55■□□□□ 0.72
CD74P04233 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
CD74P04233 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CD74P04233 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CD74P04233 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CD74P04233 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CD74P04233 EP400NL-214ENST00000641289 2402 ntBASIC19.54■□□□□ 0.72
CD74P04233 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC19.54■□□□□ 0.72
CD74P04233 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CD74P04233 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CD74P04233 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms