Protein–RNA interactions for Protein: P03956

MMP1, Interstitial collagenase, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP1P03956 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
MMP1P03956 LINC01124-201ENST00000409786 2117 ntBASIC26.93■■□□□ 1.9
MMP1P03956 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
MMP1P03956 MTX2-204ENST00000443241 799 ntTSL 3 BASIC26.93■■□□□ 1.9
MMP1P03956 AL035685.1-201ENST00000636663 812 ntBASIC26.93■■□□□ 1.9
MMP1P03956 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC26.93■■□□□ 1.9
MMP1P03956 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC26.93■■□□□ 1.9
MMP1P03956 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
MMP1P03956 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
MMP1P03956 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC26.92■■□□□ 1.9
MMP1P03956 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
MMP1P03956 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC26.91■■□□□ 1.9
MMP1P03956 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
MMP1P03956 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
MMP1P03956 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC26.91■■□□□ 1.9
MMP1P03956 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
MMP1P03956 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC26.91■■□□□ 1.9
MMP1P03956 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
MMP1P03956 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC26.9■■□□□ 1.9
MMP1P03956 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC26.9■■□□□ 1.9
MMP1P03956 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
MMP1P03956 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
MMP1P03956 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
MMP1P03956 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
MMP1P03956 AL451085.2-201ENST00000605085 799 ntBASIC26.89■■□□□ 1.9
MMP1P03956 PVT1_1.1-201ENST00000615125 194 ntBASIC26.89■■□□□ 1.9
MMP1P03956 AC090877.2-201ENST00000558441 1738 ntBASIC26.89■■□□□ 1.9
MMP1P03956 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC26.89■■□□□ 1.89
MMP1P03956 HLA-L-211ENST00000482052 1765 ntBASIC26.89■■□□□ 1.89
MMP1P03956 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
MMP1P03956 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC26.88■■□□□ 1.89
MMP1P03956 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
MMP1P03956 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC26.88■■□□□ 1.89
MMP1P03956 IDNK-201ENST00000376417 511 ntTSL 5 BASIC26.88■■□□□ 1.89
MMP1P03956 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
MMP1P03956 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
MMP1P03956 SSSCA1-AS1-201ENST00000567594 614 ntBASIC26.88■■□□□ 1.89
MMP1P03956 BHLHE23-202ENST00000612929 1109 ntBASIC26.88■■□□□ 1.89
MMP1P03956 TMEM202-AS1-202ENST00000565181 2325 ntBASIC26.88■■□□□ 1.89
MMP1P03956 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
MMP1P03956 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC26.88■■□□□ 1.89
MMP1P03956 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC26.88■■□□□ 1.89
MMP1P03956 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
MMP1P03956 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC26.87■■□□□ 1.89
MMP1P03956 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
MMP1P03956 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC26.87■■□□□ 1.89
MMP1P03956 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC26.87■■□□□ 1.89
MMP1P03956 AC074183.2-201ENST00000623112 922 ntBASIC26.87■■□□□ 1.89
MMP1P03956 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC26.87■■□□□ 1.89
MMP1P03956 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
MMP1P03956 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC26.86■■□□□ 1.89
MMP1P03956 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
MMP1P03956 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC26.86■■□□□ 1.89
MMP1P03956 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC26.86■■□□□ 1.89
MMP1P03956 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC26.86■■□□□ 1.89
MMP1P03956 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC26.86■■□□□ 1.89
MMP1P03956 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
MMP1P03956 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC26.86■■□□□ 1.89
MMP1P03956 LINC00543-201ENST00000567234 1845 ntBASIC26.86■■□□□ 1.89
MMP1P03956 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
MMP1P03956 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC26.85■■□□□ 1.89
MMP1P03956 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
MMP1P03956 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC26.85■■□□□ 1.89
MMP1P03956 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
MMP1P03956 BEX3-202ENST00000372634 753 ntTSL 2 BASIC26.85■■□□□ 1.89
MMP1P03956 AC010980.1-201ENST00000587192 1142 ntBASIC26.85■■□□□ 1.89
MMP1P03956 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
MMP1P03956 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC26.84■■□□□ 1.89
MMP1P03956 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC26.84■■□□□ 1.89
MMP1P03956 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
MMP1P03956 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC26.84■■□□□ 1.89
MMP1P03956 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC26.84■■□□□ 1.89
MMP1P03956 TRIR-205ENST00000592273 783 ntTSL 3 BASIC26.84■■□□□ 1.89
MMP1P03956 PKM-204ENST00000449901 2526 ntTSL 2 BASIC26.84■■□□□ 1.89
MMP1P03956 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC26.84■■□□□ 1.89
MMP1P03956 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
MMP1P03956 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC26.83■■□□□ 1.89
MMP1P03956 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
MMP1P03956 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC26.83■■□□□ 1.89
MMP1P03956 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
MMP1P03956 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
MMP1P03956 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC26.82■■□□□ 1.88
MMP1P03956 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC26.82■■□□□ 1.88
MMP1P03956 AC022616.5-201ENST00000518796 181 ntBASIC26.82■■□□□ 1.88
MMP1P03956 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
MMP1P03956 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
MMP1P03956 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC26.82■■□□□ 1.88
MMP1P03956 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC26.81■■□□□ 1.88
MMP1P03956 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC26.81■■□□□ 1.88
MMP1P03956 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
MMP1P03956 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
MMP1P03956 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
MMP1P03956 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC26.8■■□□□ 1.88
MMP1P03956 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC26.8■■□□□ 1.88
MMP1P03956 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
MMP1P03956 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC26.8■■□□□ 1.88
MMP1P03956 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
MMP1P03956 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
MMP1P03956 AC141586.4-201ENST00000624558 1573 ntBASIC26.8■■□□□ 1.88
MMP1P03956 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC26.79■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 431.7 ms