Protein–RNA interactions for Protein: P01138

NGF, Beta-nerve growth factor, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NGFP01138 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NGFP01138 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.23■□□□□ 0.83
NGFP01138 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NGFP01138 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NGFP01138 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.22■□□□□ 0.83
NGFP01138 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NGFP01138 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NGFP01138 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NGFP01138 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NGFP01138 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.22■□□□□ 0.83
NGFP01138 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.22■□□□□ 0.83
NGFP01138 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NGFP01138 MIR4508-201ENST00000584178 70 ntBASIC20.22■□□□□ 0.83
NGFP01138 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.22■□□□□ 0.83
NGFP01138 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NGFP01138 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.22■□□□□ 0.83
NGFP01138 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.22■□□□□ 0.83
NGFP01138 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
NGFP01138 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NGFP01138 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NGFP01138 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NGFP01138 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NGFP01138 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
NGFP01138 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NGFP01138 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NGFP01138 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.21■□□□□ 0.83
NGFP01138 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
NGFP01138 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.21■□□□□ 0.83
NGFP01138 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
NGFP01138 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.21■□□□□ 0.83
NGFP01138 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NGFP01138 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NGFP01138 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NGFP01138 AC090877.2-201ENST00000558441 1738 ntBASIC20.21■□□□□ 0.83
NGFP01138 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NGFP01138 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.21■□□□□ 0.83
NGFP01138 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NGFP01138 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
NGFP01138 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.2■□□□□ 0.82
NGFP01138 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
NGFP01138 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NGFP01138 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NGFP01138 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
NGFP01138 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NGFP01138 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NGFP01138 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
NGFP01138 YBX1P4-201ENST00000392794 808 ntBASIC20.19■□□□□ 0.82
NGFP01138 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.19■□□□□ 0.82
NGFP01138 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NGFP01138 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NGFP01138 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.19■□□□□ 0.82
NGFP01138 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
NGFP01138 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.19■□□□□ 0.82
NGFP01138 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.18■□□□□ 0.82
NGFP01138 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.18■□□□□ 0.82
NGFP01138 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
NGFP01138 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
NGFP01138 AC120024.1-201ENST00000562672 995 ntBASIC20.17■□□□□ 0.82
NGFP01138 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NGFP01138 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
NGFP01138 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
NGFP01138 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.17■□□□□ 0.82
NGFP01138 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.16■□□□□ 0.82
NGFP01138 AC103724.3-201ENST00000564481 992 ntBASIC20.16■□□□□ 0.82
NGFP01138 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NGFP01138 AC135731.1-201ENST00000569415 2548 ntBASIC20.16■□□□□ 0.82
NGFP01138 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
NGFP01138 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
NGFP01138 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NGFP01138 KRT18P24-201ENST00000344739 1156 ntBASIC20.15■□□□□ 0.82
NGFP01138 RARRES2P1-201ENST00000474487 481 ntBASIC20.15■□□□□ 0.82
NGFP01138 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.15■□□□□ 0.82
NGFP01138 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NGFP01138 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NGFP01138 AL139125.2-201ENST00000623134 1869 ntBASIC20.15■□□□□ 0.82
NGFP01138 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NGFP01138 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.14■□□□□ 0.81
NGFP01138 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.14■□□□□ 0.81
NGFP01138 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
NGFP01138 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
NGFP01138 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.14■□□□□ 0.81
NGFP01138 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NGFP01138 AC011551.1-201ENST00000614101 683 ntBASIC20.14■□□□□ 0.81
NGFP01138 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.14■□□□□ 0.81
NGFP01138 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
NGFP01138 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.14■□□□□ 0.81
NGFP01138 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NGFP01138 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NGFP01138 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NGFP01138 HLA-L-211ENST00000482052 1765 ntBASIC20.13■□□□□ 0.81
NGFP01138 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NGFP01138 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.13■□□□□ 0.81
NGFP01138 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NGFP01138 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NGFP01138 THA1P-201ENST00000590384 1145 ntBASIC20.13■□□□□ 0.81
NGFP01138 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.13■□□□□ 0.81
NGFP01138 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NGFP01138 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NGFP01138 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NGFP01138 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms