Protein–RNA interactions for Protein: O15266

SHOX, Short stature homeobox protein, humanhuman

Predictions only

Length 292 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOXO15266 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SHOXO15266 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
SHOXO15266 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SHOXO15266 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SHOXO15266 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC19.75■□□□□ 0.75
SHOXO15266 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC19.75■□□□□ 0.75
SHOXO15266 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SHOXO15266 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC19.75■□□□□ 0.75
SHOXO15266 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SHOXO15266 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
SHOXO15266 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
SHOXO15266 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SHOXO15266 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SHOXO15266 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
SHOXO15266 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SHOXO15266 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SHOXO15266 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SHOXO15266 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
SHOXO15266 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SHOXO15266 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.74■□□□□ 0.75
SHOXO15266 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SHOXO15266 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.73■□□□□ 0.75
SHOXO15266 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SHOXO15266 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
SHOXO15266 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
SHOXO15266 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SHOXO15266 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC19.73■□□□□ 0.75
SHOXO15266 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SHOXO15266 EP400NL-214ENST00000641289 2402 ntBASIC19.73■□□□□ 0.75
SHOXO15266 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SHOXO15266 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SHOXO15266 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SHOXO15266 AC126177.7-201ENST00000547904 679 ntBASIC19.72■□□□□ 0.75
SHOXO15266 AC016575.1-201ENST00000607026 382 ntBASIC19.72■□□□□ 0.75
SHOXO15266 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SHOXO15266 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SHOXO15266 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SHOXO15266 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.72■□□□□ 0.75
SHOXO15266 AC137767.1-201ENST00000602918 1920 ntBASIC19.72■□□□□ 0.75
SHOXO15266 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SHOXO15266 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
SHOXO15266 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SHOXO15266 LINC01124-201ENST00000409786 2117 ntBASIC19.71■□□□□ 0.75
SHOXO15266 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SHOXO15266 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SHOXO15266 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SHOXO15266 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC19.7■□□□□ 0.74
SHOXO15266 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
SHOXO15266 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
SHOXO15266 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SHOXO15266 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.7■□□□□ 0.74
SHOXO15266 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SHOXO15266 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SHOXO15266 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SHOXO15266 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SHOXO15266 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SHOXO15266 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SHOXO15266 METRNL-202ENST00000570778 967 ntTSL 5 BASIC19.7■□□□□ 0.74
SHOXO15266 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SHOXO15266 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
SHOXO15266 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC19.7■□□□□ 0.74
SHOXO15266 AC022211.4-201ENST00000625094 2161 ntBASIC19.7■□□□□ 0.74
SHOXO15266 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
SHOXO15266 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SHOXO15266 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SHOXO15266 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SHOXO15266 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.69■□□□□ 0.74
SHOXO15266 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
SHOXO15266 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
SHOXO15266 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SHOXO15266 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.69■□□□□ 0.74
SHOXO15266 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SHOXO15266 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.69■□□□□ 0.74
SHOXO15266 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SHOXO15266 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC19.69■□□□□ 0.74
SHOXO15266 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SHOXO15266 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.68■□□□□ 0.74
SHOXO15266 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SHOXO15266 MIR7108-201ENST00000614319 87 ntBASIC19.68■□□□□ 0.74
SHOXO15266 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SHOXO15266 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SHOXO15266 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SHOXO15266 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SHOXO15266 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SHOXO15266 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
SHOXO15266 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SHOXO15266 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SHOXO15266 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SHOXO15266 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SHOXO15266 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
SHOXO15266 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SHOXO15266 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SHOXO15266 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC19.66■□□□□ 0.74
SHOXO15266 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SHOXO15266 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.66■□□□□ 0.74
SHOXO15266 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SHOXO15266 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.66■□□□□ 0.74
SHOXO15266 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.66■□□□□ 0.74
SHOXO15266 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SHOXO15266 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms