Protein–RNA interactions for Protein: O15255

RTL8C, CAAX box protein 1, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8CO15255 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RTL8CO15255 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC15.65■□□□□ 0.1
RTL8CO15255 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RTL8CO15255 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC15.65■□□□□ 0.1
RTL8CO15255 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
RTL8CO15255 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RTL8CO15255 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RTL8CO15255 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RTL8CO15255 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC15.64■□□□□ 0.09
RTL8CO15255 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RTL8CO15255 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
RTL8CO15255 AL355001.2-201ENST00000620617 1191 ntBASIC15.64■□□□□ 0.09
RTL8CO15255 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
RTL8CO15255 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RTL8CO15255 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RTL8CO15255 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RTL8CO15255 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RTL8CO15255 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
RTL8CO15255 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
RTL8CO15255 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RTL8CO15255 SRD5A1P1-201ENST00000442297 786 ntBASIC15.63■□□□□ 0.09
RTL8CO15255 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC15.63■□□□□ 0.09
RTL8CO15255 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RTL8CO15255 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
RTL8CO15255 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
RTL8CO15255 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
RTL8CO15255 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC15.62■□□□□ 0.09
RTL8CO15255 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RTL8CO15255 AC105265.2-201ENST00000467189 838 ntBASIC15.62■□□□□ 0.09
RTL8CO15255 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
RTL8CO15255 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
RTL8CO15255 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
RTL8CO15255 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RTL8CO15255 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RTL8CO15255 FOXO3B-201ENST00000395675 1928 ntBASIC15.61■□□□□ 0.09
RTL8CO15255 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RTL8CO15255 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC15.61■□□□□ 0.09
RTL8CO15255 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC15.61■□□□□ 0.09
RTL8CO15255 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RTL8CO15255 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RTL8CO15255 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RTL8CO15255 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RTL8CO15255 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RTL8CO15255 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RTL8CO15255 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
RTL8CO15255 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RTL8CO15255 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC15.6■□□□□ 0.09
RTL8CO15255 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
RTL8CO15255 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC15.6■□□□□ 0.09
RTL8CO15255 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC15.6■□□□□ 0.09
RTL8CO15255 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RTL8CO15255 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RTL8CO15255 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RTL8CO15255 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
RTL8CO15255 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC15.6■□□□□ 0.09
RTL8CO15255 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RTL8CO15255 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC15.59■□□□□ 0.09
RTL8CO15255 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC15.59■□□□□ 0.09
RTL8CO15255 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC15.59■□□□□ 0.09
RTL8CO15255 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RTL8CO15255 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RTL8CO15255 AF213884.3-201ENST00000563833 479 ntBASIC15.59■□□□□ 0.09
RTL8CO15255 AL136967.2-201ENST00000623968 743 ntBASIC15.59■□□□□ 0.09
RTL8CO15255 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC15.59■□□□□ 0.09
RTL8CO15255 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RTL8CO15255 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RTL8CO15255 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
RTL8CO15255 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RTL8CO15255 GRAMD4P4-201ENST00000613563 1115 ntBASIC15.58■□□□□ 0.08
RTL8CO15255 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
RTL8CO15255 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RTL8CO15255 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RTL8CO15255 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
RTL8CO15255 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RTL8CO15255 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RTL8CO15255 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
RTL8CO15255 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
RTL8CO15255 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RTL8CO15255 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC15.57■□□□□ 0.08
RTL8CO15255 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC15.57■□□□□ 0.08
RTL8CO15255 ANKRD20A6P-201ENST00000618763 204 ntBASIC15.57■□□□□ 0.08
RTL8CO15255 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RTL8CO15255 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RTL8CO15255 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RTL8CO15255 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC15.57■□□□□ 0.08
RTL8CO15255 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RTL8CO15255 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC15.56■□□□□ 0.08
RTL8CO15255 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
RTL8CO15255 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RTL8CO15255 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RTL8CO15255 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC15.56■□□□□ 0.08
RTL8CO15255 MIR939-201ENST00000401314 82 ntBASIC15.56■□□□□ 0.08
RTL8CO15255 PARL-206ENST00000435888 1098 ntTSL 5 BASIC15.56■□□□□ 0.08
RTL8CO15255 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
RTL8CO15255 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC15.56■□□□□ 0.08
RTL8CO15255 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC15.56■□□□□ 0.08
RTL8CO15255 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RTL8CO15255 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
RTL8CO15255 GATM-206ENST00000558336 1522 ntTSL 2 BASIC15.56■□□□□ 0.08
RTL8CO15255 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms