Protein–RNA interactions for Protein: O00585

CCL21, C-C motif chemokine 21, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL21O00585 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CCL21O00585 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCL21O00585 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCL21O00585 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCL21O00585 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.77■□□□□ 0.92
CCL21O00585 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CCL21O00585 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
CCL21O00585 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CCL21O00585 EDA-201ENST00000338901 1233 ntBASIC20.76■□□□□ 0.91
CCL21O00585 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.76■□□□□ 0.91
CCL21O00585 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.76■□□□□ 0.91
CCL21O00585 AC024257.2-201ENST00000549699 147 ntBASIC20.76■□□□□ 0.91
CCL21O00585 AL031432.3-201ENST00000607698 485 ntBASIC20.76■□□□□ 0.91
CCL21O00585 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.76■□□□□ 0.91
CCL21O00585 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
CCL21O00585 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCL21O00585 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCL21O00585 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCL21O00585 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CCL21O00585 AL355001.2-201ENST00000620617 1191 ntBASIC20.75■□□□□ 0.91
CCL21O00585 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCL21O00585 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CCL21O00585 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCL21O00585 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCL21O00585 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCL21O00585 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.74■□□□□ 0.91
CCL21O00585 AC142086.6-201ENST00000621154 1765 ntBASIC20.74■□□□□ 0.91
CCL21O00585 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CCL21O00585 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCL21O00585 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.74■□□□□ 0.91
CCL21O00585 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.73■□□□□ 0.91
CCL21O00585 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCL21O00585 AC026271.2-201ENST00000428091 497 ntBASIC20.73■□□□□ 0.91
CCL21O00585 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCL21O00585 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCL21O00585 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCL21O00585 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.72■□□□□ 0.91
CCL21O00585 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCL21O00585 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CCL21O00585 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCL21O00585 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCL21O00585 MIR5787-201ENST00000611784 55 ntBASIC20.72■□□□□ 0.91
CCL21O00585 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.72■□□□□ 0.91
CCL21O00585 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCL21O00585 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
CCL21O00585 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.72■□□□□ 0.91
CCL21O00585 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCL21O00585 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCL21O00585 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCL21O00585 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.71■□□□□ 0.91
CCL21O00585 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCL21O00585 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.71■□□□□ 0.91
CCL21O00585 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.71■□□□□ 0.91
CCL21O00585 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.71■□□□□ 0.91
CCL21O00585 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCL21O00585 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.7■□□□□ 0.9
CCL21O00585 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
CCL21O00585 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCL21O00585 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.7■□□□□ 0.9
CCL21O00585 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCL21O00585 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.7■□□□□ 0.9
CCL21O00585 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCL21O00585 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC20.7■□□□□ 0.9
CCL21O00585 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCL21O00585 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.69■□□□□ 0.9
CCL21O00585 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC20.69■□□□□ 0.9
CCL21O00585 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCL21O00585 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CCL21O00585 AC105265.2-201ENST00000467189 838 ntBASIC20.69■□□□□ 0.9
CCL21O00585 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCL21O00585 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.69■□□□□ 0.9
CCL21O00585 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.69■□□□□ 0.9
CCL21O00585 AC104564.3-201ENST00000582367 638 ntBASIC20.69■□□□□ 0.9
CCL21O00585 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCL21O00585 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCL21O00585 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCL21O00585 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CCL21O00585 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC20.68■□□□□ 0.9
CCL21O00585 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.68■□□□□ 0.9
CCL21O00585 DUX4L19-201ENST00000557448 1267 ntBASIC20.68■□□□□ 0.9
CCL21O00585 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CCL21O00585 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.68■□□□□ 0.9
CCL21O00585 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.68■□□□□ 0.9
CCL21O00585 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCL21O00585 AC097639.1-201ENST00000565519 1891 ntBASIC20.67■□□□□ 0.9
CCL21O00585 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCL21O00585 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCL21O00585 AF213884.3-201ENST00000563833 479 ntBASIC20.66■□□□□ 0.9
CCL21O00585 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
CCL21O00585 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCL21O00585 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCL21O00585 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CCL21O00585 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CCL21O00585 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCL21O00585 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCL21O00585 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC20.66■□□□□ 0.9
CCL21O00585 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.65■□□□□ 0.9
CCL21O00585 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCL21O00585 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CCL21O00585 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms