Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.54■■□□□ 1.04
TNFRSF11BO00300 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
TNFRSF11BO00300 SMPD5-203ENST00000639008 1464 ntBASIC21.54■■□□□ 1.04
TNFRSF11BO00300 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
TNFRSF11BO00300 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
TNFRSF11BO00300 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TNFRSF11BO00300 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TNFRSF11BO00300 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TNFRSF11BO00300 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TNFRSF11BO00300 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TNFRSF11BO00300 MACF1-219ENST00000484793 834 ntTSL 2 BASIC21.53■■□□□ 1.04
TNFRSF11BO00300 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC21.53■■□□□ 1.04
TNFRSF11BO00300 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TNFRSF11BO00300 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TNFRSF11BO00300 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
TNFRSF11BO00300 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TNFRSF11BO00300 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TNFRSF11BO00300 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TNFRSF11BO00300 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TNFRSF11BO00300 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
TNFRSF11BO00300 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TNFRSF11BO00300 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
TNFRSF11BO00300 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC21.52■■□□□ 1.04
TNFRSF11BO00300 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
TNFRSF11BO00300 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.52■■□□□ 1.04
TNFRSF11BO00300 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TNFRSF11BO00300 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.52■■□□□ 1.03
TNFRSF11BO00300 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
TNFRSF11BO00300 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.51■■□□□ 1.03
TNFRSF11BO00300 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TNFRSF11BO00300 AC060814.1-201ENST00000554326 538 ntBASIC21.51■■□□□ 1.03
TNFRSF11BO00300 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TNFRSF11BO00300 AC016575.1-201ENST00000607026 382 ntBASIC21.51■■□□□ 1.03
TNFRSF11BO00300 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
TNFRSF11BO00300 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
TNFRSF11BO00300 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TNFRSF11BO00300 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.5■■□□□ 1.03
TNFRSF11BO00300 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
TNFRSF11BO00300 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TNFRSF11BO00300 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TNFRSF11BO00300 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TNFRSF11BO00300 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC21.5■■□□□ 1.03
TNFRSF11BO00300 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
TNFRSF11BO00300 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TNFRSF11BO00300 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
TNFRSF11BO00300 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
TNFRSF11BO00300 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
TNFRSF11BO00300 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TNFRSF11BO00300 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.49■■□□□ 1.03
TNFRSF11BO00300 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
TNFRSF11BO00300 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
TNFRSF11BO00300 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.49■■□□□ 1.03
TNFRSF11BO00300 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TNFRSF11BO00300 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.49■■□□□ 1.03
TNFRSF11BO00300 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
TNFRSF11BO00300 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
TNFRSF11BO00300 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC21.48■■□□□ 1.03
TNFRSF11BO00300 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TNFRSF11BO00300 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.48■■□□□ 1.03
TNFRSF11BO00300 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TNFRSF11BO00300 ABHD17AP4-201ENST00000411545 909 ntBASIC21.48■■□□□ 1.03
TNFRSF11BO00300 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.48■■□□□ 1.03
TNFRSF11BO00300 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TNFRSF11BO00300 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TNFRSF11BO00300 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TNFRSF11BO00300 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TNFRSF11BO00300 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.47■■□□□ 1.03
TNFRSF11BO00300 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TNFRSF11BO00300 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TNFRSF11BO00300 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TNFRSF11BO00300 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.03
TNFRSF11BO00300 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
TNFRSF11BO00300 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.45■■□□□ 1.03
TNFRSF11BO00300 AC079834.2-201ENST00000609776 1949 ntBASIC21.45■■□□□ 1.02
TNFRSF11BO00300 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.45■■□□□ 1.02
TNFRSF11BO00300 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TNFRSF11BO00300 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TNFRSF11BO00300 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
TNFRSF11BO00300 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TNFRSF11BO00300 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.45■■□□□ 1.02
TNFRSF11BO00300 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
TNFRSF11BO00300 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TNFRSF11BO00300 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
TNFRSF11BO00300 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
TNFRSF11BO00300 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
TNFRSF11BO00300 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TNFRSF11BO00300 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TNFRSF11BO00300 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TNFRSF11BO00300 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TNFRSF11BO00300 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TNFRSF11BO00300 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TNFRSF11BO00300 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TNFRSF11BO00300 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC21.44■■□□□ 1.02
TNFRSF11BO00300 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TNFRSF11BO00300 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
TNFRSF11BO00300 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.43■■□□□ 1.02
TNFRSF11BO00300 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
TNFRSF11BO00300 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.43■■□□□ 1.02
TNFRSF11BO00300 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TNFRSF11BO00300 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms