Protein–RNA interactions for Protein: D6RIA3

LOC285556, Uncharacterized protein, humanhuman

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC285556D6RIA3 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
LOC285556D6RIA3 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
LOC285556D6RIA3 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC27.21■■□□□ 1.95
LOC285556D6RIA3 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC27.21■■□□□ 1.95
LOC285556D6RIA3 ZNRF2P3-201ENST00000424200 374 ntBASIC27.21■■□□□ 1.95
LOC285556D6RIA3 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
LOC285556D6RIA3 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC27.2■■□□□ 1.95
LOC285556D6RIA3 MIR6722-201ENST00000617286 78 ntBASIC27.2■■□□□ 1.95
LOC285556D6RIA3 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC27.2■■□□□ 1.94
LOC285556D6RIA3 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
LOC285556D6RIA3 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC27.19■■□□□ 1.94
LOC285556D6RIA3 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC27.19■■□□□ 1.94
LOC285556D6RIA3 LBH-205ENST00000407930 756 ntTSL 2 BASIC27.19■■□□□ 1.94
LOC285556D6RIA3 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC27.19■■□□□ 1.94
LOC285556D6RIA3 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC27.19■■□□□ 1.94
LOC285556D6RIA3 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
LOC285556D6RIA3 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC27.19■■□□□ 1.94
LOC285556D6RIA3 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC27.18■■□□□ 1.94
LOC285556D6RIA3 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
LOC285556D6RIA3 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
LOC285556D6RIA3 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC27.18■■□□□ 1.94
LOC285556D6RIA3 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
LOC285556D6RIA3 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC27.18■■□□□ 1.94
LOC285556D6RIA3 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
LOC285556D6RIA3 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
LOC285556D6RIA3 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC27.17■■□□□ 1.94
LOC285556D6RIA3 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
LOC285556D6RIA3 AC097639.1-201ENST00000565519 1891 ntBASIC27.17■■□□□ 1.94
LOC285556D6RIA3 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
LOC285556D6RIA3 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC27.17■■□□□ 1.94
LOC285556D6RIA3 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC27.17■■□□□ 1.94
LOC285556D6RIA3 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC27.17■■□□□ 1.94
LOC285556D6RIA3 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
LOC285556D6RIA3 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
LOC285556D6RIA3 ERN1-208ENST00000606895 2068 ntBASIC27.16■■□□□ 1.94
LOC285556D6RIA3 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
LOC285556D6RIA3 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC27.16■■□□□ 1.94
LOC285556D6RIA3 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC27.16■■□□□ 1.94
LOC285556D6RIA3 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
LOC285556D6RIA3 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
LOC285556D6RIA3 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
LOC285556D6RIA3 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
LOC285556D6RIA3 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
LOC285556D6RIA3 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC27.14■■□□□ 1.93
LOC285556D6RIA3 EBPL-204ENST00000378272 766 ntTSL 3 BASIC27.14■■□□□ 1.93
LOC285556D6RIA3 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC27.14■■□□□ 1.93
LOC285556D6RIA3 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC27.14■■□□□ 1.93
LOC285556D6RIA3 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC27.14■■□□□ 1.93
LOC285556D6RIA3 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
LOC285556D6RIA3 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
LOC285556D6RIA3 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC27.12■■□□□ 1.93
LOC285556D6RIA3 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC27.11■■□□□ 1.93
LOC285556D6RIA3 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
LOC285556D6RIA3 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC27.11■■□□□ 1.93
LOC285556D6RIA3 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC27.1■■□□□ 1.93
LOC285556D6RIA3 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC27.1■■□□□ 1.93
LOC285556D6RIA3 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC27.1■■□□□ 1.93
LOC285556D6RIA3 PKM-203ENST00000389093 2279 ntTSL 5 BASIC27.1■■□□□ 1.93
LOC285556D6RIA3 AC010501.1-201ENST00000606270 1962 ntBASIC27.1■■□□□ 1.93
LOC285556D6RIA3 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC27.1■■□□□ 1.93
LOC285556D6RIA3 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
LOC285556D6RIA3 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
LOC285556D6RIA3 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
LOC285556D6RIA3 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
LOC285556D6RIA3 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
LOC285556D6RIA3 AC135279.3-201ENST00000610945 1311 ntBASIC27.09■■□□□ 1.93
LOC285556D6RIA3 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC27.09■■□□□ 1.93
LOC285556D6RIA3 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
LOC285556D6RIA3 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC27.08■■□□□ 1.93
LOC285556D6RIA3 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC27.08■■□□□ 1.93
LOC285556D6RIA3 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
LOC285556D6RIA3 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
LOC285556D6RIA3 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC27.08■■□□□ 1.93
LOC285556D6RIA3 AC026271.2-201ENST00000428091 497 ntBASIC27.08■■□□□ 1.93
LOC285556D6RIA3 LGR4-203ENST00000480977 492 ntTSL 2 BASIC27.08■■□□□ 1.93
LOC285556D6RIA3 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC27.08■■□□□ 1.93
LOC285556D6RIA3 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC27.08■■□□□ 1.93
LOC285556D6RIA3 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
LOC285556D6RIA3 PBX2P1-201ENST00000493219 1291 ntBASIC27.07■■□□□ 1.92
LOC285556D6RIA3 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC27.07■■□□□ 1.92
LOC285556D6RIA3 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC27.07■■□□□ 1.92
LOC285556D6RIA3 UNC93B3-201ENST00000308076 687 ntBASIC27.07■■□□□ 1.92
LOC285556D6RIA3 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC27.07■■□□□ 1.92
LOC285556D6RIA3 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
LOC285556D6RIA3 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC27.07■■□□□ 1.92
LOC285556D6RIA3 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC27.07■■□□□ 1.92
LOC285556D6RIA3 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC27.07■■□□□ 1.92
LOC285556D6RIA3 AC142381.2-201ENST00000566120 298 ntBASIC27.07■■□□□ 1.92
LOC285556D6RIA3 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC27.06■■□□□ 1.92
LOC285556D6RIA3 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC27.06■■□□□ 1.92
LOC285556D6RIA3 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC27.06■■□□□ 1.92
LOC285556D6RIA3 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
LOC285556D6RIA3 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC27.06■■□□□ 1.92
LOC285556D6RIA3 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC27.06■■□□□ 1.92
LOC285556D6RIA3 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC27.06■■□□□ 1.92
LOC285556D6RIA3 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC27.06■■□□□ 1.92
LOC285556D6RIA3 AL136162.1-201ENST00000607711 1078 ntBASIC27.06■■□□□ 1.92
LOC285556D6RIA3 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
LOC285556D6RIA3 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
LOC285556D6RIA3 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC27.05■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms