Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
SPDYE4A6NLX3 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC25.92■■□□□ 1.74
SPDYE4A6NLX3 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
SPDYE4A6NLX3 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
SPDYE4A6NLX3 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
SPDYE4A6NLX3 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
SPDYE4A6NLX3 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC25.92■■□□□ 1.74
SPDYE4A6NLX3 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC25.91■■□□□ 1.74
SPDYE4A6NLX3 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
SPDYE4A6NLX3 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
SPDYE4A6NLX3 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC25.91■■□□□ 1.74
SPDYE4A6NLX3 AL592295.1-201ENST00000400984 884 ntBASIC25.91■■□□□ 1.74
SPDYE4A6NLX3 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
SPDYE4A6NLX3 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC25.91■■□□□ 1.74
SPDYE4A6NLX3 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC25.91■■□□□ 1.74
SPDYE4A6NLX3 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
SPDYE4A6NLX3 WHAMMP3-201ENST00000611636 1609 ntBASIC25.91■■□□□ 1.74
SPDYE4A6NLX3 AL139125.2-201ENST00000623134 1869 ntBASIC25.91■■□□□ 1.74
SPDYE4A6NLX3 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC25.91■■□□□ 1.74
SPDYE4A6NLX3 MTURN-203ENST00000409688 843 ntTSL 2 BASIC25.9■■□□□ 1.74
SPDYE4A6NLX3 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
SPDYE4A6NLX3 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC25.9■■□□□ 1.74
SPDYE4A6NLX3 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC25.89■■□□□ 1.74
SPDYE4A6NLX3 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
SPDYE4A6NLX3 THA1P-201ENST00000590384 1145 ntBASIC25.89■■□□□ 1.74
SPDYE4A6NLX3 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.74
SPDYE4A6NLX3 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC25.88■■□□□ 1.73
SPDYE4A6NLX3 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
SPDYE4A6NLX3 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
SPDYE4A6NLX3 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC25.88■■□□□ 1.73
SPDYE4A6NLX3 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC25.88■■□□□ 1.73
SPDYE4A6NLX3 MTX2-204ENST00000443241 799 ntTSL 3 BASIC25.88■■□□□ 1.73
SPDYE4A6NLX3 OR2A1-AS1-204ENST00000470435 602 ntBASIC25.88■■□□□ 1.73
SPDYE4A6NLX3 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC25.88■■□□□ 1.73
SPDYE4A6NLX3 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC25.88■■□□□ 1.73
SPDYE4A6NLX3 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC25.88■■□□□ 1.73
SPDYE4A6NLX3 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
SPDYE4A6NLX3 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
SPDYE4A6NLX3 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
SPDYE4A6NLX3 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC25.87■■□□□ 1.73
SPDYE4A6NLX3 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC25.87■■□□□ 1.73
SPDYE4A6NLX3 GUSBP5-201ENST00000418136 578 ntBASIC25.87■■□□□ 1.73
SPDYE4A6NLX3 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
SPDYE4A6NLX3 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
SPDYE4A6NLX3 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC25.87■■□□□ 1.73
SPDYE4A6NLX3 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
SPDYE4A6NLX3 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC25.87■■□□□ 1.73
SPDYE4A6NLX3 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC25.87■■□□□ 1.73
SPDYE4A6NLX3 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
SPDYE4A6NLX3 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC25.86■■□□□ 1.73
SPDYE4A6NLX3 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
SPDYE4A6NLX3 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
SPDYE4A6NLX3 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC25.86■■□□□ 1.73
SPDYE4A6NLX3 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
SPDYE4A6NLX3 AC103724.3-201ENST00000564481 992 ntBASIC25.86■■□□□ 1.73
SPDYE4A6NLX3 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC25.86■■□□□ 1.73
SPDYE4A6NLX3 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
SPDYE4A6NLX3 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
SPDYE4A6NLX3 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC25.85■■□□□ 1.73
SPDYE4A6NLX3 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC25.85■■□□□ 1.73
SPDYE4A6NLX3 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC25.85■■□□□ 1.73
SPDYE4A6NLX3 IDNK-201ENST00000376417 511 ntTSL 5 BASIC25.85■■□□□ 1.73
SPDYE4A6NLX3 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
SPDYE4A6NLX3 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC25.85■■□□□ 1.73
SPDYE4A6NLX3 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
SPDYE4A6NLX3 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
SPDYE4A6NLX3 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC25.85■■□□□ 1.73
SPDYE4A6NLX3 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
SPDYE4A6NLX3 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SPDYE4A6NLX3 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SPDYE4A6NLX3 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC25.84■■□□□ 1.73
SPDYE4A6NLX3 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
SPDYE4A6NLX3 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
SPDYE4A6NLX3 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
SPDYE4A6NLX3 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC25.83■■□□□ 1.73
SPDYE4A6NLX3 PRTG-204ENST00000561292 833 ntTSL 3 BASIC25.83■■□□□ 1.73
SPDYE4A6NLX3 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
SPDYE4A6NLX3 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC25.82■■□□□ 1.72
SPDYE4A6NLX3 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
SPDYE4A6NLX3 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC25.82■■□□□ 1.72
SPDYE4A6NLX3 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SPDYE4A6NLX3 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SPDYE4A6NLX3 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SPDYE4A6NLX3 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
SPDYE4A6NLX3 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC25.82■■□□□ 1.72
SPDYE4A6NLX3 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC25.81■■□□□ 1.72
SPDYE4A6NLX3 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
SPDYE4A6NLX3 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
SPDYE4A6NLX3 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC25.81■■□□□ 1.72
SPDYE4A6NLX3 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC25.81■■□□□ 1.72
SPDYE4A6NLX3 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
SPDYE4A6NLX3 RNF146-205ENST00000477776 762 ntTSL 3 BASIC25.81■■□□□ 1.72
SPDYE4A6NLX3 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
SPDYE4A6NLX3 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC25.81■■□□□ 1.72
SPDYE4A6NLX3 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
SPDYE4A6NLX3 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC25.81■■□□□ 1.72
SPDYE4A6NLX3 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
SPDYE4A6NLX3 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
SPDYE4A6NLX3 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC25.81■■□□□ 1.72
SPDYE4A6NLX3 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms