Protein–RNA interactions for Protein: A0A0C4DH28

TRGV4, T-cell receptor gamma variable 4 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV4A0A0C4DH28 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRGV4A0A0C4DH28 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC16.68■□□□□ 0.26
TRGV4A0A0C4DH28 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRGV4A0A0C4DH28 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRGV4A0A0C4DH28 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRGV4A0A0C4DH28 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRGV4A0A0C4DH28 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRGV4A0A0C4DH28 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
TRGV4A0A0C4DH28 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRGV4A0A0C4DH28 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC16.67■□□□□ 0.26
TRGV4A0A0C4DH28 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
TRGV4A0A0C4DH28 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRGV4A0A0C4DH28 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRGV4A0A0C4DH28 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRGV4A0A0C4DH28 AC139795.1-202ENST00000500444 432 ntBASIC16.67■□□□□ 0.26
TRGV4A0A0C4DH28 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRGV4A0A0C4DH28 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRGV4A0A0C4DH28 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRGV4A0A0C4DH28 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRGV4A0A0C4DH28 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRGV4A0A0C4DH28 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRGV4A0A0C4DH28 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRGV4A0A0C4DH28 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC16.66■□□□□ 0.26
TRGV4A0A0C4DH28 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC16.66■□□□□ 0.26
TRGV4A0A0C4DH28 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRGV4A0A0C4DH28 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
TRGV4A0A0C4DH28 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC16.66■□□□□ 0.26
TRGV4A0A0C4DH28 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC16.66■□□□□ 0.26
TRGV4A0A0C4DH28 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRGV4A0A0C4DH28 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC16.65■□□□□ 0.26
TRGV4A0A0C4DH28 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRGV4A0A0C4DH28 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TRGV4A0A0C4DH28 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRGV4A0A0C4DH28 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRGV4A0A0C4DH28 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
TRGV4A0A0C4DH28 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRGV4A0A0C4DH28 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRGV4A0A0C4DH28 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
TRGV4A0A0C4DH28 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRGV4A0A0C4DH28 DUX4L18-201ENST00000553347 1267 ntBASIC16.64■□□□□ 0.25
TRGV4A0A0C4DH28 AC087393.1-201ENST00000582896 145 ntBASIC16.64■□□□□ 0.25
TRGV4A0A0C4DH28 BHLHE23-202ENST00000612929 1109 ntBASIC16.64■□□□□ 0.25
TRGV4A0A0C4DH28 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
TRGV4A0A0C4DH28 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC16.64■□□□□ 0.25
TRGV4A0A0C4DH28 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRGV4A0A0C4DH28 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRGV4A0A0C4DH28 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
TRGV4A0A0C4DH28 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRGV4A0A0C4DH28 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
TRGV4A0A0C4DH28 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRGV4A0A0C4DH28 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRGV4A0A0C4DH28 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRGV4A0A0C4DH28 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRGV4A0A0C4DH28 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRGV4A0A0C4DH28 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC16.63■□□□□ 0.25
TRGV4A0A0C4DH28 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC16.63■□□□□ 0.25
TRGV4A0A0C4DH28 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRGV4A0A0C4DH28 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC16.63■□□□□ 0.25
TRGV4A0A0C4DH28 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC16.63■□□□□ 0.25
TRGV4A0A0C4DH28 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRGV4A0A0C4DH28 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRGV4A0A0C4DH28 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
TRGV4A0A0C4DH28 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRGV4A0A0C4DH28 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
TRGV4A0A0C4DH28 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRGV4A0A0C4DH28 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC16.62■□□□□ 0.25
TRGV4A0A0C4DH28 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRGV4A0A0C4DH28 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRGV4A0A0C4DH28 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRGV4A0A0C4DH28 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC16.62■□□□□ 0.25
TRGV4A0A0C4DH28 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC16.62■□□□□ 0.25
TRGV4A0A0C4DH28 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC16.62■□□□□ 0.25
TRGV4A0A0C4DH28 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
TRGV4A0A0C4DH28 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRGV4A0A0C4DH28 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRGV4A0A0C4DH28 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRGV4A0A0C4DH28 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRGV4A0A0C4DH28 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRGV4A0A0C4DH28 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC16.61■□□□□ 0.25
TRGV4A0A0C4DH28 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRGV4A0A0C4DH28 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRGV4A0A0C4DH28 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRGV4A0A0C4DH28 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRGV4A0A0C4DH28 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRGV4A0A0C4DH28 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC16.61■□□□□ 0.25
TRGV4A0A0C4DH28 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRGV4A0A0C4DH28 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC16.61■□□□□ 0.25
TRGV4A0A0C4DH28 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
TRGV4A0A0C4DH28 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRGV4A0A0C4DH28 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRGV4A0A0C4DH28 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRGV4A0A0C4DH28 AL592295.1-201ENST00000400984 884 ntBASIC16.6■□□□□ 0.25
TRGV4A0A0C4DH28 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC16.6■□□□□ 0.25
TRGV4A0A0C4DH28 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC16.6■□□□□ 0.25
TRGV4A0A0C4DH28 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC16.6■□□□□ 0.25
TRGV4A0A0C4DH28 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRGV4A0A0C4DH28 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
TRGV4A0A0C4DH28 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRGV4A0A0C4DH28 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRGV4A0A0C4DH28 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms