Protein–RNA interactions for Protein: A0A0C4DH25

IGKV3D-20, Immunoglobulin kappa variable 3D-20, humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-20A0A0C4DH25 MIR3960-201ENST00000583311 91 ntBASIC17.3■□□□□ 0.36
IGKV3D-20A0A0C4DH25 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
IGKV3D-20A0A0C4DH25 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
IGKV3D-20A0A0C4DH25 ABCB10P4-201ENST00000566803 2184 ntBASIC17.3■□□□□ 0.36
IGKV3D-20A0A0C4DH25 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
IGKV3D-20A0A0C4DH25 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
IGKV3D-20A0A0C4DH25 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
IGKV3D-20A0A0C4DH25 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
IGKV3D-20A0A0C4DH25 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
IGKV3D-20A0A0C4DH25 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC17.3■□□□□ 0.36
IGKV3D-20A0A0C4DH25 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
IGKV3D-20A0A0C4DH25 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
IGKV3D-20A0A0C4DH25 DUSP8P5-201ENST00000422884 1815 ntBASIC17.29■□□□□ 0.36
IGKV3D-20A0A0C4DH25 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC17.29■□□□□ 0.36
IGKV3D-20A0A0C4DH25 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC17.29■□□□□ 0.36
IGKV3D-20A0A0C4DH25 MOB2-207ENST00000614710 705 ntTSL 5 BASIC17.29■□□□□ 0.36
IGKV3D-20A0A0C4DH25 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
IGKV3D-20A0A0C4DH25 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
IGKV3D-20A0A0C4DH25 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
IGKV3D-20A0A0C4DH25 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
IGKV3D-20A0A0C4DH25 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC17.29■□□□□ 0.36
IGKV3D-20A0A0C4DH25 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
IGKV3D-20A0A0C4DH25 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
IGKV3D-20A0A0C4DH25 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
IGKV3D-20A0A0C4DH25 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
IGKV3D-20A0A0C4DH25 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC17.28■□□□□ 0.36
IGKV3D-20A0A0C4DH25 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
IGKV3D-20A0A0C4DH25 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
IGKV3D-20A0A0C4DH25 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
IGKV3D-20A0A0C4DH25 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
IGKV3D-20A0A0C4DH25 MACF1-219ENST00000484793 834 ntTSL 2 BASIC17.28■□□□□ 0.36
IGKV3D-20A0A0C4DH25 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC17.28■□□□□ 0.36
IGKV3D-20A0A0C4DH25 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
IGKV3D-20A0A0C4DH25 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
IGKV3D-20A0A0C4DH25 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
IGKV3D-20A0A0C4DH25 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
IGKV3D-20A0A0C4DH25 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
IGKV3D-20A0A0C4DH25 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
IGKV3D-20A0A0C4DH25 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
IGKV3D-20A0A0C4DH25 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
IGKV3D-20A0A0C4DH25 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
IGKV3D-20A0A0C4DH25 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
IGKV3D-20A0A0C4DH25 AC016575.1-201ENST00000607026 382 ntBASIC17.27■□□□□ 0.36
IGKV3D-20A0A0C4DH25 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
IGKV3D-20A0A0C4DH25 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
IGKV3D-20A0A0C4DH25 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC17.27■□□□□ 0.35
IGKV3D-20A0A0C4DH25 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
IGKV3D-20A0A0C4DH25 SHD-204ENST00000599689 1729 ntTSL 5 BASIC17.27■□□□□ 0.35
IGKV3D-20A0A0C4DH25 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
IGKV3D-20A0A0C4DH25 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC17.26■□□□□ 0.35
IGKV3D-20A0A0C4DH25 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
IGKV3D-20A0A0C4DH25 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
IGKV3D-20A0A0C4DH25 ABHD17AP4-201ENST00000411545 909 ntBASIC17.26■□□□□ 0.35
IGKV3D-20A0A0C4DH25 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
IGKV3D-20A0A0C4DH25 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
IGKV3D-20A0A0C4DH25 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
IGKV3D-20A0A0C4DH25 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
IGKV3D-20A0A0C4DH25 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
IGKV3D-20A0A0C4DH25 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IGKV3D-20A0A0C4DH25 SMPD5-203ENST00000639008 1464 ntBASIC17.25■□□□□ 0.35
IGKV3D-20A0A0C4DH25 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IGKV3D-20A0A0C4DH25 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
IGKV3D-20A0A0C4DH25 AC060814.1-201ENST00000554326 538 ntBASIC17.25■□□□□ 0.35
IGKV3D-20A0A0C4DH25 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
IGKV3D-20A0A0C4DH25 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC17.25■□□□□ 0.35
IGKV3D-20A0A0C4DH25 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
IGKV3D-20A0A0C4DH25 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
IGKV3D-20A0A0C4DH25 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
IGKV3D-20A0A0C4DH25 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IGKV3D-20A0A0C4DH25 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IGKV3D-20A0A0C4DH25 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
IGKV3D-20A0A0C4DH25 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
IGKV3D-20A0A0C4DH25 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC17.24■□□□□ 0.35
IGKV3D-20A0A0C4DH25 HLA-L-211ENST00000482052 1765 ntBASIC17.24■□□□□ 0.35
IGKV3D-20A0A0C4DH25 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
IGKV3D-20A0A0C4DH25 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC17.24■□□□□ 0.35
IGKV3D-20A0A0C4DH25 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IGKV3D-20A0A0C4DH25 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
IGKV3D-20A0A0C4DH25 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
IGKV3D-20A0A0C4DH25 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC17.23■□□□□ 0.35
IGKV3D-20A0A0C4DH25 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
IGKV3D-20A0A0C4DH25 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
IGKV3D-20A0A0C4DH25 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
IGKV3D-20A0A0C4DH25 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IGKV3D-20A0A0C4DH25 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
IGKV3D-20A0A0C4DH25 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
IGKV3D-20A0A0C4DH25 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC17.23■□□□□ 0.35
IGKV3D-20A0A0C4DH25 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IGKV3D-20A0A0C4DH25 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IGKV3D-20A0A0C4DH25 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC17.23■□□□□ 0.35
IGKV3D-20A0A0C4DH25 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC17.23■□□□□ 0.35
IGKV3D-20A0A0C4DH25 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
IGKV3D-20A0A0C4DH25 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC17.22■□□□□ 0.35
IGKV3D-20A0A0C4DH25 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
IGKV3D-20A0A0C4DH25 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
IGKV3D-20A0A0C4DH25 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
IGKV3D-20A0A0C4DH25 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
IGKV3D-20A0A0C4DH25 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
IGKV3D-20A0A0C4DH25 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
IGKV3D-20A0A0C4DH25 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms