Protein–RNA interactions for Protein: A0A0B4J264

TRAV38-1, T-cell receptor alpha variable 38-1 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV38-1A0A0B4J264 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.65■□□□□ 0.74
TRAV38-1A0A0B4J264 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
TRAV38-1A0A0B4J264 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAV38-1A0A0B4J264 AC120024.1-201ENST00000562672 995 ntBASIC19.64■□□□□ 0.73
TRAV38-1A0A0B4J264 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAV38-1A0A0B4J264 AC090877.2-201ENST00000558441 1738 ntBASIC19.64■□□□□ 0.73
TRAV38-1A0A0B4J264 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAV38-1A0A0B4J264 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAV38-1A0A0B4J264 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC19.64■□□□□ 0.73
TRAV38-1A0A0B4J264 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.64■□□□□ 0.73
TRAV38-1A0A0B4J264 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
TRAV38-1A0A0B4J264 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAV38-1A0A0B4J264 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.63■□□□□ 0.73
TRAV38-1A0A0B4J264 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.63■□□□□ 0.73
TRAV38-1A0A0B4J264 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.63■□□□□ 0.73
TRAV38-1A0A0B4J264 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRAV38-1A0A0B4J264 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAV38-1A0A0B4J264 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV38-1A0A0B4J264 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV38-1A0A0B4J264 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.62■□□□□ 0.73
TRAV38-1A0A0B4J264 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
TRAV38-1A0A0B4J264 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV38-1A0A0B4J264 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC19.62■□□□□ 0.73
TRAV38-1A0A0B4J264 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV38-1A0A0B4J264 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAV38-1A0A0B4J264 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAV38-1A0A0B4J264 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAV38-1A0A0B4J264 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAV38-1A0A0B4J264 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
TRAV38-1A0A0B4J264 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAV38-1A0A0B4J264 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAV38-1A0A0B4J264 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.61■□□□□ 0.73
TRAV38-1A0A0B4J264 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.61■□□□□ 0.73
TRAV38-1A0A0B4J264 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAV38-1A0A0B4J264 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAV38-1A0A0B4J264 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAV38-1A0A0B4J264 AC022211.4-201ENST00000625094 2161 ntBASIC19.61■□□□□ 0.73
TRAV38-1A0A0B4J264 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.61■□□□□ 0.73
TRAV38-1A0A0B4J264 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRAV38-1A0A0B4J264 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.61■□□□□ 0.73
TRAV38-1A0A0B4J264 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAV38-1A0A0B4J264 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV38-1A0A0B4J264 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV38-1A0A0B4J264 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV38-1A0A0B4J264 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.6■□□□□ 0.73
TRAV38-1A0A0B4J264 MIR6089-201ENST00000616698 64 ntBASIC19.6■□□□□ 0.73
TRAV38-1A0A0B4J264 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV38-1A0A0B4J264 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
TRAV38-1A0A0B4J264 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
TRAV38-1A0A0B4J264 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
TRAV38-1A0A0B4J264 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
TRAV38-1A0A0B4J264 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV38-1A0A0B4J264 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.59■□□□□ 0.73
TRAV38-1A0A0B4J264 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV38-1A0A0B4J264 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV38-1A0A0B4J264 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.59■□□□□ 0.73
TRAV38-1A0A0B4J264 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
TRAV38-1A0A0B4J264 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC19.59■□□□□ 0.73
TRAV38-1A0A0B4J264 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC19.58■□□□□ 0.73
TRAV38-1A0A0B4J264 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TRAV38-1A0A0B4J264 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRAV38-1A0A0B4J264 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.58■□□□□ 0.72
TRAV38-1A0A0B4J264 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRAV38-1A0A0B4J264 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
TRAV38-1A0A0B4J264 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC19.58■□□□□ 0.72
TRAV38-1A0A0B4J264 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRAV38-1A0A0B4J264 AC142381.3-201ENST00000568208 1670 ntBASIC19.58■□□□□ 0.72
TRAV38-1A0A0B4J264 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TRAV38-1A0A0B4J264 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV38-1A0A0B4J264 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV38-1A0A0B4J264 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV38-1A0A0B4J264 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV38-1A0A0B4J264 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV38-1A0A0B4J264 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV38-1A0A0B4J264 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV38-1A0A0B4J264 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
TRAV38-1A0A0B4J264 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV38-1A0A0B4J264 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV38-1A0A0B4J264 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.56■□□□□ 0.72
TRAV38-1A0A0B4J264 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV38-1A0A0B4J264 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.56■□□□□ 0.72
TRAV38-1A0A0B4J264 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV38-1A0A0B4J264 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV38-1A0A0B4J264 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV38-1A0A0B4J264 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV38-1A0A0B4J264 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV38-1A0A0B4J264 AP003733.4-201ENST00000623785 1697 ntBASIC19.56■□□□□ 0.72
TRAV38-1A0A0B4J264 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAV38-1A0A0B4J264 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAV38-1A0A0B4J264 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.55■□□□□ 0.72
TRAV38-1A0A0B4J264 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAV38-1A0A0B4J264 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAV38-1A0A0B4J264 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
TRAV38-1A0A0B4J264 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAV38-1A0A0B4J264 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAV38-1A0A0B4J264 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.54■□□□□ 0.72
TRAV38-1A0A0B4J264 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRAV38-1A0A0B4J264 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRAV38-1A0A0B4J264 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRAV38-1A0A0B4J264 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms