Protein–RNA interactions for Protein: A0A0B4J262

TRAV8-6, T-cell receptor alpha variable 8-6 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6A0A0B4J262 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC17■□□□□ 0.31
TRAV8-6A0A0B4J262 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRAV8-6A0A0B4J262 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC17■□□□□ 0.31
TRAV8-6A0A0B4J262 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV8-6A0A0B4J262 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
TRAV8-6A0A0B4J262 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
TRAV8-6A0A0B4J262 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV8-6A0A0B4J262 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC17■□□□□ 0.31
TRAV8-6A0A0B4J262 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV8-6A0A0B4J262 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
TRAV8-6A0A0B4J262 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV8-6A0A0B4J262 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
TRAV8-6A0A0B4J262 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV8-6A0A0B4J262 AC138932.3-201ENST00000567634 1902 ntBASIC16.99■□□□□ 0.31
TRAV8-6A0A0B4J262 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV8-6A0A0B4J262 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV8-6A0A0B4J262 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV8-6A0A0B4J262 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC16.98■□□□□ 0.31
TRAV8-6A0A0B4J262 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC16.98■□□□□ 0.31
TRAV8-6A0A0B4J262 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV8-6A0A0B4J262 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV8-6A0A0B4J262 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV8-6A0A0B4J262 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
TRAV8-6A0A0B4J262 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV8-6A0A0B4J262 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV8-6A0A0B4J262 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC16.97■□□□□ 0.31
TRAV8-6A0A0B4J262 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV8-6A0A0B4J262 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC16.97■□□□□ 0.31
TRAV8-6A0A0B4J262 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV8-6A0A0B4J262 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV8-6A0A0B4J262 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV8-6A0A0B4J262 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV8-6A0A0B4J262 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV8-6A0A0B4J262 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV8-6A0A0B4J262 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV8-6A0A0B4J262 AL121603.2-201ENST00000557373 2117 ntBASIC16.97■□□□□ 0.31
TRAV8-6A0A0B4J262 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV8-6A0A0B4J262 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC16.96■□□□□ 0.31
TRAV8-6A0A0B4J262 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV8-6A0A0B4J262 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
TRAV8-6A0A0B4J262 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC16.96■□□□□ 0.31
TRAV8-6A0A0B4J262 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV8-6A0A0B4J262 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC16.96■□□□□ 0.31
TRAV8-6A0A0B4J262 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC16.96■□□□□ 0.31
TRAV8-6A0A0B4J262 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
TRAV8-6A0A0B4J262 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC16.96■□□□□ 0.31
TRAV8-6A0A0B4J262 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRAV8-6A0A0B4J262 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV8-6A0A0B4J262 AC022211.4-201ENST00000625094 2161 ntBASIC16.95■□□□□ 0.3
TRAV8-6A0A0B4J262 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV8-6A0A0B4J262 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
TRAV8-6A0A0B4J262 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV8-6A0A0B4J262 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV8-6A0A0B4J262 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
TRAV8-6A0A0B4J262 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV8-6A0A0B4J262 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV8-6A0A0B4J262 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV8-6A0A0B4J262 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV8-6A0A0B4J262 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV8-6A0A0B4J262 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC16.94■□□□□ 0.3
TRAV8-6A0A0B4J262 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
TRAV8-6A0A0B4J262 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV8-6A0A0B4J262 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC16.94■□□□□ 0.3
TRAV8-6A0A0B4J262 CEP120-209ENST00000515110 606 ntTSL 3 BASIC16.94■□□□□ 0.3
TRAV8-6A0A0B4J262 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
TRAV8-6A0A0B4J262 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV8-6A0A0B4J262 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV8-6A0A0B4J262 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
TRAV8-6A0A0B4J262 RNF165-205ENST00000588679 2904 ntBASIC16.94■□□□□ 0.3
TRAV8-6A0A0B4J262 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC16.94■□□□□ 0.3
TRAV8-6A0A0B4J262 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV8-6A0A0B4J262 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
TRAV8-6A0A0B4J262 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV8-6A0A0B4J262 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV8-6A0A0B4J262 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV8-6A0A0B4J262 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV8-6A0A0B4J262 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC16.93■□□□□ 0.3
TRAV8-6A0A0B4J262 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV8-6A0A0B4J262 AC022413.1-201ENST00000624602 984 ntBASIC16.93■□□□□ 0.3
TRAV8-6A0A0B4J262 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC16.93■□□□□ 0.3
TRAV8-6A0A0B4J262 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV8-6A0A0B4J262 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV8-6A0A0B4J262 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV8-6A0A0B4J262 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC16.93■□□□□ 0.3
TRAV8-6A0A0B4J262 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV8-6A0A0B4J262 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV8-6A0A0B4J262 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV8-6A0A0B4J262 HES4-202ENST00000428771 1040 ntTSL 2 BASIC16.92■□□□□ 0.3
TRAV8-6A0A0B4J262 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC16.92■□□□□ 0.3
TRAV8-6A0A0B4J262 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
TRAV8-6A0A0B4J262 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
TRAV8-6A0A0B4J262 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC16.92■□□□□ 0.3
TRAV8-6A0A0B4J262 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC16.92■□□□□ 0.3
TRAV8-6A0A0B4J262 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC16.91■□□□□ 0.3
TRAV8-6A0A0B4J262 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV8-6A0A0B4J262 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV8-6A0A0B4J262 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
TRAV8-6A0A0B4J262 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC16.91■□□□□ 0.3
TRAV8-6A0A0B4J262 AC142472.1-201ENST00000612013 1741 ntBASIC16.91■□□□□ 0.3
TRAV8-6A0A0B4J262 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms