Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
CCDC187A0A096LP49 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CCDC187A0A096LP49 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CCDC187A0A096LP49 LBH-205ENST00000407930 756 ntTSL 2 BASIC22.29■■□□□ 1.16
CCDC187A0A096LP49 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC22.29■■□□□ 1.16
CCDC187A0A096LP49 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CCDC187A0A096LP49 AL136162.1-201ENST00000607711 1078 ntBASIC22.28■■□□□ 1.16
CCDC187A0A096LP49 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CCDC187A0A096LP49 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CCDC187A0A096LP49 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC22.27■■□□□ 1.16
CCDC187A0A096LP49 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
CCDC187A0A096LP49 ZNRF2P3-201ENST00000424200 374 ntBASIC22.27■■□□□ 1.16
CCDC187A0A096LP49 SRD5A1P1-201ENST00000442297 786 ntBASIC22.27■■□□□ 1.16
CCDC187A0A096LP49 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC22.27■■□□□ 1.16
CCDC187A0A096LP49 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC22.27■■□□□ 1.16
CCDC187A0A096LP49 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC22.27■■□□□ 1.16
CCDC187A0A096LP49 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CCDC187A0A096LP49 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CCDC187A0A096LP49 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CCDC187A0A096LP49 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC22.26■■□□□ 1.15
CCDC187A0A096LP49 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC22.26■■□□□ 1.15
CCDC187A0A096LP49 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CCDC187A0A096LP49 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CCDC187A0A096LP49 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
CCDC187A0A096LP49 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
CCDC187A0A096LP49 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
CCDC187A0A096LP49 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC22.25■■□□□ 1.15
CCDC187A0A096LP49 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CCDC187A0A096LP49 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC22.25■■□□□ 1.15
CCDC187A0A096LP49 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
CCDC187A0A096LP49 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC22.25■■□□□ 1.15
CCDC187A0A096LP49 AC135279.3-201ENST00000610945 1311 ntBASIC22.25■■□□□ 1.15
CCDC187A0A096LP49 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC22.25■■□□□ 1.15
CCDC187A0A096LP49 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
CCDC187A0A096LP49 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CCDC187A0A096LP49 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CCDC187A0A096LP49 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CCDC187A0A096LP49 RARRES2P6-201ENST00000567333 442 ntBASIC22.24■■□□□ 1.15
CCDC187A0A096LP49 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
CCDC187A0A096LP49 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC22.23■■□□□ 1.15
CCDC187A0A096LP49 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CCDC187A0A096LP49 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
CCDC187A0A096LP49 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC22.23■■□□□ 1.15
CCDC187A0A096LP49 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC22.23■■□□□ 1.15
CCDC187A0A096LP49 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CCDC187A0A096LP49 AC097639.1-201ENST00000565519 1891 ntBASIC22.22■■□□□ 1.15
CCDC187A0A096LP49 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CCDC187A0A096LP49 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC22.22■■□□□ 1.15
CCDC187A0A096LP49 SUDS3P1-201ENST00000505831 966 ntBASIC22.22■■□□□ 1.15
CCDC187A0A096LP49 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC22.22■■□□□ 1.15
CCDC187A0A096LP49 AL031432.3-201ENST00000607698 485 ntBASIC22.22■■□□□ 1.15
CCDC187A0A096LP49 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
CCDC187A0A096LP49 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
CCDC187A0A096LP49 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
CCDC187A0A096LP49 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CCDC187A0A096LP49 EDA-201ENST00000338901 1233 ntBASIC22.21■■□□□ 1.15
CCDC187A0A096LP49 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CCDC187A0A096LP49 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CCDC187A0A096LP49 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC22.21■■□□□ 1.15
CCDC187A0A096LP49 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
CCDC187A0A096LP49 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC22.21■■□□□ 1.15
CCDC187A0A096LP49 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CCDC187A0A096LP49 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CCDC187A0A096LP49 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CCDC187A0A096LP49 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC22.2■■□□□ 1.14
CCDC187A0A096LP49 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC22.2■■□□□ 1.14
CCDC187A0A096LP49 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CCDC187A0A096LP49 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC22.2■■□□□ 1.14
CCDC187A0A096LP49 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC22.19■■□□□ 1.14
CCDC187A0A096LP49 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
CCDC187A0A096LP49 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CCDC187A0A096LP49 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC22.19■■□□□ 1.14
CCDC187A0A096LP49 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CCDC187A0A096LP49 AC024257.2-201ENST00000549699 147 ntBASIC22.19■■□□□ 1.14
CCDC187A0A096LP49 AL355001.2-201ENST00000620617 1191 ntBASIC22.19■■□□□ 1.14
CCDC187A0A096LP49 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC22.19■■□□□ 1.14
CCDC187A0A096LP49 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CCDC187A0A096LP49 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CCDC187A0A096LP49 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
CCDC187A0A096LP49 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CCDC187A0A096LP49 GATM-206ENST00000558336 1522 ntTSL 2 BASIC22.18■■□□□ 1.14
CCDC187A0A096LP49 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
CCDC187A0A096LP49 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
CCDC187A0A096LP49 AC004448.1-201ENST00000458332 883 ntBASIC22.18■■□□□ 1.14
CCDC187A0A096LP49 LGR4-203ENST00000480977 492 ntTSL 2 BASIC22.18■■□□□ 1.14
CCDC187A0A096LP49 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CCDC187A0A096LP49 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC22.17■■□□□ 1.14
CCDC187A0A096LP49 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC22.17■■□□□ 1.14
CCDC187A0A096LP49 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC22.17■■□□□ 1.14
CCDC187A0A096LP49 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC22.17■■□□□ 1.14
CCDC187A0A096LP49 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC22.17■■□□□ 1.14
CCDC187A0A096LP49 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
CCDC187A0A096LP49 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC22.17■■□□□ 1.14
CCDC187A0A096LP49 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
CCDC187A0A096LP49 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CCDC187A0A096LP49 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CCDC187A0A096LP49 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC22.16■■□□□ 1.14
CCDC187A0A096LP49 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CCDC187A0A096LP49 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CCDC187A0A096LP49 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms