Protein–RNA interactions for Protein: A0A075B6N4

TRBV25-1, T-cell receptor beta variable 25-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV25-1A0A075B6N4 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV25-1A0A075B6N4 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
TRBV25-1A0A075B6N4 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV25-1A0A075B6N4 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV25-1A0A075B6N4 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV25-1A0A075B6N4 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV25-1A0A075B6N4 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV25-1A0A075B6N4 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV25-1A0A075B6N4 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC16.69■□□□□ 0.26
TRBV25-1A0A075B6N4 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV25-1A0A075B6N4 EED-207ENST00000528180 1745 ntTSL 5 BASIC16.68■□□□□ 0.26
TRBV25-1A0A075B6N4 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV25-1A0A075B6N4 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV25-1A0A075B6N4 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
TRBV25-1A0A075B6N4 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC16.68■□□□□ 0.26
TRBV25-1A0A075B6N4 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV25-1A0A075B6N4 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV25-1A0A075B6N4 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV25-1A0A075B6N4 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV25-1A0A075B6N4 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV25-1A0A075B6N4 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC16.67■□□□□ 0.26
TRBV25-1A0A075B6N4 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV25-1A0A075B6N4 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV25-1A0A075B6N4 AL117328.2-201ENST00000624617 1940 ntBASIC16.67■□□□□ 0.26
TRBV25-1A0A075B6N4 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV25-1A0A075B6N4 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV25-1A0A075B6N4 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC16.67■□□□□ 0.26
TRBV25-1A0A075B6N4 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV25-1A0A075B6N4 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV25-1A0A075B6N4 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV25-1A0A075B6N4 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
TRBV25-1A0A075B6N4 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV25-1A0A075B6N4 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV25-1A0A075B6N4 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV25-1A0A075B6N4 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV25-1A0A075B6N4 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV25-1A0A075B6N4 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV25-1A0A075B6N4 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV25-1A0A075B6N4 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV25-1A0A075B6N4 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV25-1A0A075B6N4 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV25-1A0A075B6N4 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC16.66■□□□□ 0.26
TRBV25-1A0A075B6N4 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV25-1A0A075B6N4 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
TRBV25-1A0A075B6N4 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV25-1A0A075B6N4 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV25-1A0A075B6N4 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
TRBV25-1A0A075B6N4 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRBV25-1A0A075B6N4 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC16.65■□□□□ 0.26
TRBV25-1A0A075B6N4 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRBV25-1A0A075B6N4 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRBV25-1A0A075B6N4 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRBV25-1A0A075B6N4 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRBV25-1A0A075B6N4 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRBV25-1A0A075B6N4 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC16.65■□□□□ 0.26
TRBV25-1A0A075B6N4 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRBV25-1A0A075B6N4 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRBV25-1A0A075B6N4 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRBV25-1A0A075B6N4 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC16.65■□□□□ 0.26
TRBV25-1A0A075B6N4 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
TRBV25-1A0A075B6N4 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC16.64■□□□□ 0.26
TRBV25-1A0A075B6N4 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.26
TRBV25-1A0A075B6N4 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRBV25-1A0A075B6N4 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRBV25-1A0A075B6N4 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
TRBV25-1A0A075B6N4 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRBV25-1A0A075B6N4 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRBV25-1A0A075B6N4 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
TRBV25-1A0A075B6N4 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
TRBV25-1A0A075B6N4 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
TRBV25-1A0A075B6N4 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC16.64■□□□□ 0.25
TRBV25-1A0A075B6N4 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
TRBV25-1A0A075B6N4 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC16.64■□□□□ 0.25
TRBV25-1A0A075B6N4 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRBV25-1A0A075B6N4 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC16.64■□□□□ 0.25
TRBV25-1A0A075B6N4 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC16.64■□□□□ 0.25
TRBV25-1A0A075B6N4 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRBV25-1A0A075B6N4 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRBV25-1A0A075B6N4 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
TRBV25-1A0A075B6N4 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRBV25-1A0A075B6N4 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC16.63■□□□□ 0.25
TRBV25-1A0A075B6N4 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
TRBV25-1A0A075B6N4 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
TRBV25-1A0A075B6N4 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC16.63■□□□□ 0.25
TRBV25-1A0A075B6N4 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC16.63■□□□□ 0.25
TRBV25-1A0A075B6N4 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRBV25-1A0A075B6N4 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRBV25-1A0A075B6N4 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
TRBV25-1A0A075B6N4 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRBV25-1A0A075B6N4 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRBV25-1A0A075B6N4 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRBV25-1A0A075B6N4 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRBV25-1A0A075B6N4 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRBV25-1A0A075B6N4 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRBV25-1A0A075B6N4 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRBV25-1A0A075B6N4 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRBV25-1A0A075B6N4 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRBV25-1A0A075B6N4 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
TRBV25-1A0A075B6N4 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRBV25-1A0A075B6N4 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 12.6 ms