Protein–RNA interactions for Protein: Q9Y2A7

NCKAP1, Nck-associated protein 1, humanhuman

Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1Q9Y2A7 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.78■□□□□ 0.12
NCKAP1Q9Y2A7 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
NCKAP1Q9Y2A7 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NCKAP1Q9Y2A7 AC104989.1-201ENST00000519711 778 ntBASIC15.78■□□□□ 0.12
NCKAP1Q9Y2A7 PTP4A1P2-201ENST00000546033 454 ntBASIC15.78■□□□□ 0.12
NCKAP1Q9Y2A7 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.78■□□□□ 0.12
NCKAP1Q9Y2A7 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NCKAP1Q9Y2A7 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.78■□□□□ 0.12
NCKAP1Q9Y2A7 AL022328.1-201ENST00000610050 478 ntBASIC15.78■□□□□ 0.12
NCKAP1Q9Y2A7 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC15.78■□□□□ 0.12
NCKAP1Q9Y2A7 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.78■□□□□ 0.12
NCKAP1Q9Y2A7 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
NCKAP1Q9Y2A7 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NCKAP1Q9Y2A7 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NCKAP1Q9Y2A7 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
NCKAP1Q9Y2A7 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NCKAP1Q9Y2A7 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
NCKAP1Q9Y2A7 PCDHB19P-201ENST00000570871 2371 ntBASIC15.78■□□□□ 0.12
NCKAP1Q9Y2A7 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
NCKAP1Q9Y2A7 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NCKAP1Q9Y2A7 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NCKAP1Q9Y2A7 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NCKAP1Q9Y2A7 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
NCKAP1Q9Y2A7 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NCKAP1Q9Y2A7 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.78■□□□□ 0.12
NCKAP1Q9Y2A7 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
NCKAP1Q9Y2A7 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NCKAP1Q9Y2A7 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.78■□□□□ 0.12
NCKAP1Q9Y2A7 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
NCKAP1Q9Y2A7 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
NCKAP1Q9Y2A7 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NCKAP1Q9Y2A7 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
NCKAP1Q9Y2A7 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
NCKAP1Q9Y2A7 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NCKAP1Q9Y2A7 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NCKAP1Q9Y2A7 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NCKAP1Q9Y2A7 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.12
NCKAP1Q9Y2A7 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
NCKAP1Q9Y2A7 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NCKAP1Q9Y2A7 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.77■□□□□ 0.12
NCKAP1Q9Y2A7 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.77■□□□□ 0.12
NCKAP1Q9Y2A7 AC018665.1-201ENST00000622927 1362 ntBASIC15.77■□□□□ 0.12
NCKAP1Q9Y2A7 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.12
NCKAP1Q9Y2A7 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
NCKAP1Q9Y2A7 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
NCKAP1Q9Y2A7 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
NCKAP1Q9Y2A7 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
NCKAP1Q9Y2A7 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NCKAP1Q9Y2A7 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.77■□□□□ 0.12
NCKAP1Q9Y2A7 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
NCKAP1Q9Y2A7 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NCKAP1Q9Y2A7 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
NCKAP1Q9Y2A7 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
NCKAP1Q9Y2A7 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NCKAP1Q9Y2A7 LBX2-201ENST00000341396 886 ntTSL 3 BASIC15.77■□□□□ 0.12
NCKAP1Q9Y2A7 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC15.77■□□□□ 0.12
NCKAP1Q9Y2A7 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
NCKAP1Q9Y2A7 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
NCKAP1Q9Y2A7 HLA-V-201ENST00000429037 534 ntBASIC15.77■□□□□ 0.12
NCKAP1Q9Y2A7 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.77■□□□□ 0.12
NCKAP1Q9Y2A7 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
NCKAP1Q9Y2A7 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NCKAP1Q9Y2A7 KRT223P-202ENST00000449164 1292 ntBASIC15.77■□□□□ 0.12
NCKAP1Q9Y2A7 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC15.77■□□□□ 0.12
NCKAP1Q9Y2A7 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NCKAP1Q9Y2A7 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.77■□□□□ 0.12
NCKAP1Q9Y2A7 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC15.77■□□□□ 0.12
NCKAP1Q9Y2A7 AC120045.2-201ENST00000567334 178 ntBASIC15.77■□□□□ 0.12
NCKAP1Q9Y2A7 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.77■□□□□ 0.12
NCKAP1Q9Y2A7 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.77■□□□□ 0.12
NCKAP1Q9Y2A7 AC097359.3-201ENST00000603982 1210 ntBASIC15.77■□□□□ 0.12
NCKAP1Q9Y2A7 COX11-210ENST00000639671 696 ntBASIC15.77■□□□□ 0.12
NCKAP1Q9Y2A7 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NCKAP1Q9Y2A7 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
NCKAP1Q9Y2A7 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.77■□□□□ 0.11
NCKAP1Q9Y2A7 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
NCKAP1Q9Y2A7 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
NCKAP1Q9Y2A7 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.77■□□□□ 0.11
NCKAP1Q9Y2A7 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.11
NCKAP1Q9Y2A7 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
NCKAP1Q9Y2A7 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.77■□□□□ 0.11
NCKAP1Q9Y2A7 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.77■□□□□ 0.11
NCKAP1Q9Y2A7 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
NCKAP1Q9Y2A7 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
NCKAP1Q9Y2A7 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
NCKAP1Q9Y2A7 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
NCKAP1Q9Y2A7 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.77■□□□□ 0.11
NCKAP1Q9Y2A7 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NCKAP1Q9Y2A7 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
NCKAP1Q9Y2A7 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NCKAP1Q9Y2A7 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.76■□□□□ 0.11
NCKAP1Q9Y2A7 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.76■□□□□ 0.11
NCKAP1Q9Y2A7 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NCKAP1Q9Y2A7 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NCKAP1Q9Y2A7 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.76■□□□□ 0.11
NCKAP1Q9Y2A7 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.76■□□□□ 0.11
NCKAP1Q9Y2A7 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NCKAP1Q9Y2A7 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NCKAP1Q9Y2A7 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.76■□□□□ 0.11
NCKAP1Q9Y2A7 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms