Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHA4Q9UN74 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHA4Q9UN74 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
PCDHA4Q9UN74 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHA4Q9UN74 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC17.95■□□□□ 0.46
PCDHA4Q9UN74 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHA4Q9UN74 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHA4Q9UN74 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
PCDHA4Q9UN74 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHA4Q9UN74 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC17.95■□□□□ 0.46
PCDHA4Q9UN74 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC17.95■□□□□ 0.46
PCDHA4Q9UN74 FAM207CP-201ENST00000443486 507 ntBASIC17.95■□□□□ 0.46
PCDHA4Q9UN74 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC17.95■□□□□ 0.46
PCDHA4Q9UN74 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC17.95■□□□□ 0.46
PCDHA4Q9UN74 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC17.95■□□□□ 0.46
PCDHA4Q9UN74 RN7SL204P-201ENST00000582831 262 ntBASIC17.95■□□□□ 0.46
PCDHA4Q9UN74 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHA4Q9UN74 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHA4Q9UN74 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
PCDHA4Q9UN74 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHA4Q9UN74 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC17.95■□□□□ 0.46
PCDHA4Q9UN74 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHA4Q9UN74 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
PCDHA4Q9UN74 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHA4Q9UN74 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHA4Q9UN74 AC084364.1-201ENST00000551967 1556 ntBASIC17.95■□□□□ 0.46
PCDHA4Q9UN74 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
PCDHA4Q9UN74 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHA4Q9UN74 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
PCDHA4Q9UN74 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
PCDHA4Q9UN74 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
PCDHA4Q9UN74 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHA4Q9UN74 TP73-209ENST00000603362 1668 ntTSL 5 BASIC17.94■□□□□ 0.46
PCDHA4Q9UN74 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDHA4Q9UN74 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHA4Q9UN74 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHA4Q9UN74 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC17.94■□□□□ 0.46
PCDHA4Q9UN74 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHA4Q9UN74 PKIG-203ENST00000372887 769 ntTSL 3 BASIC17.94■□□□□ 0.46
PCDHA4Q9UN74 WDR53-203ENST00000429115 683 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDHA4Q9UN74 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDHA4Q9UN74 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC17.94■□□□□ 0.46
PCDHA4Q9UN74 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
PCDHA4Q9UN74 RHOA-206ENST00000454011 889 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDHA4Q9UN74 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
PCDHA4Q9UN74 AC023310.3-201ENST00000557027 670 ntBASIC17.94■□□□□ 0.46
PCDHA4Q9UN74 AC100756.1-201ENST00000562736 682 ntBASIC17.94■□□□□ 0.46
PCDHA4Q9UN74 AC138749.3-201ENST00000567691 622 ntBASIC17.94■□□□□ 0.46
PCDHA4Q9UN74 LINC02560-201ENST00000596379 459 ntBASIC17.94■□□□□ 0.46
PCDHA4Q9UN74 AC116165.1-201ENST00000611806 668 ntBASIC17.94■□□□□ 0.46
PCDHA4Q9UN74 HADH-212ENST00000638621 741 ntTSL 5 BASIC17.94■□□□□ 0.46
PCDHA4Q9UN74 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHA4Q9UN74 API5-202ENST00000420461 2009 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDHA4Q9UN74 MFF-204ENST00000353339 2186 ntTSL 5 BASIC17.94■□□□□ 0.46
PCDHA4Q9UN74 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHA4Q9UN74 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
PCDHA4Q9UN74 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.94■□□□□ 0.46
PCDHA4Q9UN74 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
PCDHA4Q9UN74 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHA4Q9UN74 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHA4Q9UN74 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHA4Q9UN74 PPT1-215ENST00000641471 2368 ntBASIC17.94■□□□□ 0.46
PCDHA4Q9UN74 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.93■□□□□ 0.46
PCDHA4Q9UN74 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHA4Q9UN74 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHA4Q9UN74 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
PCDHA4Q9UN74 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHA4Q9UN74 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.93■□□□□ 0.46
PCDHA4Q9UN74 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
PCDHA4Q9UN74 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC17.93■□□□□ 0.46
PCDHA4Q9UN74 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHA4Q9UN74 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHA4Q9UN74 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHA4Q9UN74 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
PCDHA4Q9UN74 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHA4Q9UN74 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC17.93■□□□□ 0.46
PCDHA4Q9UN74 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
PCDHA4Q9UN74 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
PCDHA4Q9UN74 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHA4Q9UN74 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC17.93■□□□□ 0.46
PCDHA4Q9UN74 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC17.93■□□□□ 0.46
PCDHA4Q9UN74 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC17.93■□□□□ 0.46
PCDHA4Q9UN74 AC002472.2-201ENST00000442739 958 ntBASIC17.93■□□□□ 0.46
PCDHA4Q9UN74 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHA4Q9UN74 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC17.93■□□□□ 0.46
PCDHA4Q9UN74 TPRX2P-201ENST00000535362 881 ntBASIC17.93■□□□□ 0.46
PCDHA4Q9UN74 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC17.93■□□□□ 0.46
PCDHA4Q9UN74 RARRES2P5-201ENST00000564013 466 ntBASIC17.93■□□□□ 0.46
PCDHA4Q9UN74 MIR4745-201ENST00000577608 62 ntBASIC17.93■□□□□ 0.46
PCDHA4Q9UN74 UBL5-208ENST00000593087 320 ntTSL 3 BASIC17.93■□□□□ 0.46
PCDHA4Q9UN74 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC17.93■□□□□ 0.46
PCDHA4Q9UN74 AC000095.1-201ENST00000603208 874 ntBASIC17.93■□□□□ 0.46
PCDHA4Q9UN74 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHA4Q9UN74 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC17.93■□□□□ 0.46
PCDHA4Q9UN74 AC008761.3-201ENST00000624803 892 ntBASIC17.93■□□□□ 0.46
PCDHA4Q9UN74 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
PCDHA4Q9UN74 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC17.93■□□□□ 0.46
PCDHA4Q9UN74 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
PCDHA4Q9UN74 AL162727.3-201ENST00000635661 2787 ntBASIC17.93■□□□□ 0.46
PCDHA4Q9UN74 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms