Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 MBP-202ENST00000355994 2772 ntTSL 5 BASIC19.14■□□□□ 0.65
ECHDC1Q9NTX5 TP73-209ENST00000603362 1668 ntTSL 5 BASIC19.14■□□□□ 0.65
ECHDC1Q9NTX5 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
ECHDC1Q9NTX5 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
ECHDC1Q9NTX5 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ECHDC1Q9NTX5 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
ECHDC1Q9NTX5 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ECHDC1Q9NTX5 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ECHDC1Q9NTX5 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ECHDC1Q9NTX5 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
ECHDC1Q9NTX5 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
ECHDC1Q9NTX5 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ECHDC1Q9NTX5 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC19.13■□□□□ 0.65
ECHDC1Q9NTX5 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ECHDC1Q9NTX5 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
ECHDC1Q9NTX5 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ECHDC1Q9NTX5 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ECHDC1Q9NTX5 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC19.13■□□□□ 0.65
ECHDC1Q9NTX5 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC19.13■□□□□ 0.65
ECHDC1Q9NTX5 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ECHDC1Q9NTX5 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ECHDC1Q9NTX5 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC19.13■□□□□ 0.65
ECHDC1Q9NTX5 SPDYE19P-201ENST00000338590 713 ntBASIC19.13■□□□□ 0.65
ECHDC1Q9NTX5 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
ECHDC1Q9NTX5 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC19.13■□□□□ 0.65
ECHDC1Q9NTX5 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC19.13■□□□□ 0.65
ECHDC1Q9NTX5 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
ECHDC1Q9NTX5 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
ECHDC1Q9NTX5 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
ECHDC1Q9NTX5 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC19.13■□□□□ 0.65
ECHDC1Q9NTX5 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ECHDC1Q9NTX5 AC084364.1-201ENST00000551967 1556 ntBASIC19.13■□□□□ 0.65
ECHDC1Q9NTX5 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC19.13■□□□□ 0.65
ECHDC1Q9NTX5 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ECHDC1Q9NTX5 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC19.13■□□□□ 0.65
ECHDC1Q9NTX5 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ECHDC1Q9NTX5 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ECHDC1Q9NTX5 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
ECHDC1Q9NTX5 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ECHDC1Q9NTX5 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ECHDC1Q9NTX5 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
ECHDC1Q9NTX5 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
ECHDC1Q9NTX5 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ECHDC1Q9NTX5 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ECHDC1Q9NTX5 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ECHDC1Q9NTX5 AC092384.3-202ENST00000564646 2873 ntBASIC19.12■□□□□ 0.65
ECHDC1Q9NTX5 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC19.12■□□□□ 0.65
ECHDC1Q9NTX5 MFF-204ENST00000353339 2186 ntTSL 5 BASIC19.12■□□□□ 0.65
ECHDC1Q9NTX5 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC19.12■□□□□ 0.65
ECHDC1Q9NTX5 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ECHDC1Q9NTX5 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ECHDC1Q9NTX5 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC19.12■□□□□ 0.65
ECHDC1Q9NTX5 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC19.12■□□□□ 0.65
ECHDC1Q9NTX5 AC022532.1-201ENST00000624563 1728 ntBASIC19.12■□□□□ 0.65
ECHDC1Q9NTX5 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
ECHDC1Q9NTX5 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
ECHDC1Q9NTX5 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ECHDC1Q9NTX5 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ECHDC1Q9NTX5 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC19.12■□□□□ 0.65
ECHDC1Q9NTX5 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
ECHDC1Q9NTX5 PKIG-203ENST00000372887 769 ntTSL 3 BASIC19.12■□□□□ 0.65
ECHDC1Q9NTX5 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC19.12■□□□□ 0.65
ECHDC1Q9NTX5 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC19.12■□□□□ 0.65
ECHDC1Q9NTX5 FAM207CP-201ENST00000443486 507 ntBASIC19.12■□□□□ 0.65
ECHDC1Q9NTX5 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC19.12■□□□□ 0.65
ECHDC1Q9NTX5 RHOA-206ENST00000454011 889 ntTSL 2 BASIC19.12■□□□□ 0.65
ECHDC1Q9NTX5 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC19.12■□□□□ 0.65
ECHDC1Q9NTX5 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC19.12■□□□□ 0.65
ECHDC1Q9NTX5 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC19.12■□□□□ 0.65
ECHDC1Q9NTX5 AC023310.3-201ENST00000557027 670 ntBASIC19.12■□□□□ 0.65
ECHDC1Q9NTX5 AC100756.1-201ENST00000562736 682 ntBASIC19.12■□□□□ 0.65
ECHDC1Q9NTX5 AC138749.3-201ENST00000567691 622 ntBASIC19.12■□□□□ 0.65
ECHDC1Q9NTX5 RN7SL204P-201ENST00000582831 262 ntBASIC19.12■□□□□ 0.65
ECHDC1Q9NTX5 AC116165.1-201ENST00000611806 668 ntBASIC19.12■□□□□ 0.65
ECHDC1Q9NTX5 HADH-212ENST00000638621 741 ntTSL 5 BASIC19.12■□□□□ 0.65
ECHDC1Q9NTX5 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ECHDC1Q9NTX5 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC19.12■□□□□ 0.65
ECHDC1Q9NTX5 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
ECHDC1Q9NTX5 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ECHDC1Q9NTX5 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
ECHDC1Q9NTX5 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
ECHDC1Q9NTX5 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
ECHDC1Q9NTX5 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.12■□□□□ 0.65
ECHDC1Q9NTX5 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ECHDC1Q9NTX5 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC19.12■□□□□ 0.65
ECHDC1Q9NTX5 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
ECHDC1Q9NTX5 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
ECHDC1Q9NTX5 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC19.12■□□□□ 0.65
ECHDC1Q9NTX5 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC19.11■□□□□ 0.65
ECHDC1Q9NTX5 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ECHDC1Q9NTX5 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
ECHDC1Q9NTX5 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
ECHDC1Q9NTX5 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
ECHDC1Q9NTX5 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ECHDC1Q9NTX5 AC073347.1-201ENST00000421633 2643 ntBASIC19.11■□□□□ 0.65
ECHDC1Q9NTX5 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
ECHDC1Q9NTX5 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ECHDC1Q9NTX5 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC19.11■□□□□ 0.65
ECHDC1Q9NTX5 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
ECHDC1Q9NTX5 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms