Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
LCE3DQ9BYE3 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
LCE3DQ9BYE3 CACNA1G-207ENST00000429973 7120 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
LCE3DQ9BYE3 CACNA1G-217ENST00000507336 7116 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
LCE3DQ9BYE3 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC4.29□□□□□ -1.72
LCE3DQ9BYE3 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
LCE3DQ9BYE3 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC4.29□□□□□ -1.72
LCE3DQ9BYE3 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
LCE3DQ9BYE3 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC4.29□□□□□ -1.72
LCE3DQ9BYE3 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
LCE3DQ9BYE3 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
LCE3DQ9BYE3 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
LCE3DQ9BYE3 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC4.29□□□□□ -1.72
LCE3DQ9BYE3 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
LCE3DQ9BYE3 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
LCE3DQ9BYE3 HCFC1-202ENST00000369984 8375 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
LCE3DQ9BYE3 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
LCE3DQ9BYE3 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
LCE3DQ9BYE3 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
LCE3DQ9BYE3 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC4.29□□□□□ -1.72
LCE3DQ9BYE3 TRPM2-203ENST00000397928 6221 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
LCE3DQ9BYE3 AC015656.1-201ENST00000624209 3578 ntBASIC4.29□□□□□ -1.72
LCE3DQ9BYE3 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
LCE3DQ9BYE3 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
LCE3DQ9BYE3 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
LCE3DQ9BYE3 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
LCE3DQ9BYE3 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
LCE3DQ9BYE3 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
LCE3DQ9BYE3 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
LCE3DQ9BYE3 AC091951.1-201ENST00000512854 2465 ntBASIC4.29□□□□□ -1.72
LCE3DQ9BYE3 FGD5P1-202ENST00000614866 2498 ntBASIC4.29□□□□□ -1.72
LCE3DQ9BYE3 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
LCE3DQ9BYE3 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
LCE3DQ9BYE3 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
LCE3DQ9BYE3 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC4.29□□□□□ -1.72
LCE3DQ9BYE3 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC4.29□□□□□ -1.72
LCE3DQ9BYE3 INHBA-201ENST00000242208 6064 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
LCE3DQ9BYE3 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
LCE3DQ9BYE3 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
LCE3DQ9BYE3 AC011477.6-201ENST00000604980 1927 ntBASIC4.29□□□□□ -1.72
LCE3DQ9BYE3 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
LCE3DQ9BYE3 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC4.29□□□□□ -1.72
LCE3DQ9BYE3 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
LCE3DQ9BYE3 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
LCE3DQ9BYE3 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
LCE3DQ9BYE3 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 FN1-201ENST00000323926 8708 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 IRAK1BP1-201ENST00000369940 5656 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 SETD1B-204ENST00000619791 5901 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 SPTB-202ENST00000389720 6321 ntTSL 5 BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 PMPCAP1-201ENST00000508114 1576 ntBASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 UBC-206ENST00000538617 1303 ntTSL 5 BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 C18orf15-201ENST00000623680 2534 ntBASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 NUMA1-205ENST00000393695 7343 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 CYB5RL-201ENST00000287899 5777 ntTSL 3 BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 ST8SIA1-203ENST00000396037 9714 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 COCH-203ENST00000460581 2688 ntTSL 2 BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
LCE3DQ9BYE3 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms