Protein–RNA interactions for Protein: Q9BW85

CCDC94, Coiled-coil domain-containing protein 94, humanhuman

Predicted RBP Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC94Q9BW85 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC94Q9BW85 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC94Q9BW85 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC94Q9BW85 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC94Q9BW85 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC94Q9BW85 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC17.96■□□□□ 0.47
CCDC94Q9BW85 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC94Q9BW85 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC94Q9BW85 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
CCDC94Q9BW85 AC005912.2-201ENST00000619492 2400 ntBASIC17.96■□□□□ 0.46
CCDC94Q9BW85 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC94Q9BW85 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC94Q9BW85 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
CCDC94Q9BW85 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC94Q9BW85 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CCDC94Q9BW85 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC94Q9BW85 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC17.95■□□□□ 0.46
CCDC94Q9BW85 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.95■□□□□ 0.46
CCDC94Q9BW85 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC94Q9BW85 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
CCDC94Q9BW85 GPAA1P2-202ENST00000606848 1787 ntBASIC17.95■□□□□ 0.46
CCDC94Q9BW85 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC94Q9BW85 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
CCDC94Q9BW85 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CCDC94Q9BW85 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC94Q9BW85 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.95■□□□□ 0.46
CCDC94Q9BW85 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CCDC94Q9BW85 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC94Q9BW85 AC106028.4-201ENST00000614509 607 ntBASIC17.95■□□□□ 0.46
CCDC94Q9BW85 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC94Q9BW85 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.95■□□□□ 0.46
CCDC94Q9BW85 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC94Q9BW85 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC94Q9BW85 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC94Q9BW85 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC94Q9BW85 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC94Q9BW85 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC94Q9BW85 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CCDC94Q9BW85 AL031731.1-201ENST00000642131 2094 ntBASIC17.95■□□□□ 0.46
CCDC94Q9BW85 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC94Q9BW85 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC94Q9BW85 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
CCDC94Q9BW85 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC94Q9BW85 LINC01101-201ENST00000622953 1884 ntBASIC17.95■□□□□ 0.46
CCDC94Q9BW85 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC94Q9BW85 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC94Q9BW85 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC17.94■□□□□ 0.46
CCDC94Q9BW85 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC94Q9BW85 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC94Q9BW85 AC073439.1-201ENST00000624121 1774 ntBASIC17.94■□□□□ 0.46
CCDC94Q9BW85 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC94Q9BW85 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC94Q9BW85 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC94Q9BW85 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC94Q9BW85 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC94Q9BW85 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CCDC94Q9BW85 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC94Q9BW85 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC94Q9BW85 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.94■□□□□ 0.46
CCDC94Q9BW85 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.94■□□□□ 0.46
CCDC94Q9BW85 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.94■□□□□ 0.46
CCDC94Q9BW85 FAM86GP-201ENST00000448322 971 ntBASIC17.94■□□□□ 0.46
CCDC94Q9BW85 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.94■□□□□ 0.46
CCDC94Q9BW85 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.94■□□□□ 0.46
CCDC94Q9BW85 CYMP-203ENST00000474680 1263 ntBASIC17.94■□□□□ 0.46
CCDC94Q9BW85 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.94■□□□□ 0.46
CCDC94Q9BW85 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC94Q9BW85 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC17.94■□□□□ 0.46
CCDC94Q9BW85 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC94Q9BW85 AL512356.2-201ENST00000546955 174 ntBASIC17.94■□□□□ 0.46
CCDC94Q9BW85 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC94Q9BW85 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.94■□□□□ 0.46
CCDC94Q9BW85 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC94Q9BW85 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC94Q9BW85 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.94■□□□□ 0.46
CCDC94Q9BW85 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CCDC94Q9BW85 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.94■□□□□ 0.46
CCDC94Q9BW85 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.94■□□□□ 0.46
CCDC94Q9BW85 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC94Q9BW85 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CCDC94Q9BW85 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC94Q9BW85 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC94Q9BW85 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC94Q9BW85 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC94Q9BW85 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CCDC94Q9BW85 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC94Q9BW85 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
CCDC94Q9BW85 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC94Q9BW85 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC94Q9BW85 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC17.94■□□□□ 0.46
CCDC94Q9BW85 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC94Q9BW85 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC94Q9BW85 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC17.94■□□□□ 0.46
CCDC94Q9BW85 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC94Q9BW85 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC17.94■□□□□ 0.46
CCDC94Q9BW85 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC94Q9BW85 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.93■□□□□ 0.46
CCDC94Q9BW85 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CCDC94Q9BW85 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC94Q9BW85 AC009090.5-201ENST00000624886 2285 ntBASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms