Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC12.85□□□□□ -0.35
RAB40CQ96S21 ACTL9-202ENST00000612068 1252 ntBASIC12.85□□□□□ -0.35
RAB40CQ96S21 MIR1199-201ENST00000621445 119 ntBASIC12.85□□□□□ -0.35
RAB40CQ96S21 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
RAB40CQ96S21 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC12.85□□□□□ -0.35
RAB40CQ96S21 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RAB40CQ96S21 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC12.85□□□□□ -0.35
RAB40CQ96S21 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
RAB40CQ96S21 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
RAB40CQ96S21 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC12.85□□□□□ -0.35
RAB40CQ96S21 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
RAB40CQ96S21 AC023024.2-201ENST00000623561 1993 ntBASIC12.85□□□□□ -0.35
RAB40CQ96S21 R3HDM2P2-201ENST00000401880 2116 ntBASIC12.85□□□□□ -0.35
RAB40CQ96S21 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RAB40CQ96S21 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
RAB40CQ96S21 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RAB40CQ96S21 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
RAB40CQ96S21 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RAB40CQ96S21 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAB40CQ96S21 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC12.84□□□□□ -0.35
RAB40CQ96S21 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RAB40CQ96S21 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RAB40CQ96S21 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAB40CQ96S21 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAB40CQ96S21 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAB40CQ96S21 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
RAB40CQ96S21 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAB40CQ96S21 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAB40CQ96S21 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAB40CQ96S21 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAB40CQ96S21 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RAB40CQ96S21 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
RAB40CQ96S21 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC12.84□□□□□ -0.35
RAB40CQ96S21 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAB40CQ96S21 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAB40CQ96S21 AKR1C7P-201ENST00000305623 895 ntBASIC12.84□□□□□ -0.35
RAB40CQ96S21 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC12.84□□□□□ -0.35
RAB40CQ96S21 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
RAB40CQ96S21 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RAB40CQ96S21 AC073621.1-201ENST00000392730 636 ntBASIC12.84□□□□□ -0.35
RAB40CQ96S21 ATP6V0CP3-201ENST00000417255 467 ntBASIC12.84□□□□□ -0.35
RAB40CQ96S21 GPX1P2-201ENST00000429271 606 ntBASIC12.84□□□□□ -0.35
RAB40CQ96S21 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAB40CQ96S21 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC12.84□□□□□ -0.35
RAB40CQ96S21 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAB40CQ96S21 AF238378.1-201ENST00000526806 358 ntBASIC12.84□□□□□ -0.35
RAB40CQ96S21 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC12.84□□□□□ -0.35
RAB40CQ96S21 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC12.84□□□□□ -0.35
RAB40CQ96S21 PNMT-203ENST00000581428 677 ntTSL 2 BASIC12.84□□□□□ -0.35
RAB40CQ96S21 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC12.84□□□□□ -0.35
RAB40CQ96S21 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC12.84□□□□□ -0.35
RAB40CQ96S21 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC12.84□□□□□ -0.35
RAB40CQ96S21 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAB40CQ96S21 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
RAB40CQ96S21 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
RAB40CQ96S21 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC12.84□□□□□ -0.35
RAB40CQ96S21 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC12.84□□□□□ -0.35
RAB40CQ96S21 AC005912.2-201ENST00000619492 2400 ntBASIC12.84□□□□□ -0.35
RAB40CQ96S21 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAB40CQ96S21 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC12.84□□□□□ -0.35
RAB40CQ96S21 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAB40CQ96S21 ST20-AS1-201ENST00000560255 4223 ntBASIC12.84□□□□□ -0.35
RAB40CQ96S21 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAB40CQ96S21 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RAB40CQ96S21 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
RAB40CQ96S21 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAB40CQ96S21 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
RAB40CQ96S21 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RAB40CQ96S21 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC12.84□□□□□ -0.35
RAB40CQ96S21 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC12.84□□□□□ -0.35
RAB40CQ96S21 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
RAB40CQ96S21 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAB40CQ96S21 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RAB40CQ96S21 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
RAB40CQ96S21 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC12.83□□□□□ -0.35
RAB40CQ96S21 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC12.83□□□□□ -0.35
RAB40CQ96S21 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
RAB40CQ96S21 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC12.83□□□□□ -0.36
RAB40CQ96S21 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
RAB40CQ96S21 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAB40CQ96S21 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAB40CQ96S21 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAB40CQ96S21 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RAB40CQ96S21 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
RAB40CQ96S21 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC12.83□□□□□ -0.36
RAB40CQ96S21 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC12.83□□□□□ -0.36
RAB40CQ96S21 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAB40CQ96S21 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAB40CQ96S21 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAB40CQ96S21 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC12.83□□□□□ -0.36
RAB40CQ96S21 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RAB40CQ96S21 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RAB40CQ96S21 RAC2-202ENST00000401529 569 ntTSL 4 BASIC12.83□□□□□ -0.36
RAB40CQ96S21 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
RAB40CQ96S21 FAM8A3P-201ENST00000427218 844 ntBASIC12.83□□□□□ -0.36
RAB40CQ96S21 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC12.83□□□□□ -0.36
RAB40CQ96S21 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC12.83□□□□□ -0.36
RAB40CQ96S21 TOLLIP-AS1-201ENST00000530897 939 ntBASIC12.83□□□□□ -0.36
RAB40CQ96S21 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC12.83□□□□□ -0.36
RAB40CQ96S21 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms