Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC14.92□□□□□ -0.02
NR1H4Q96RI1 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC14.92□□□□□ -0.02
NR1H4Q96RI1 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC14.92□□□□□ -0.02
NR1H4Q96RI1 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
NR1H4Q96RI1 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC14.92□□□□□ -0.02
NR1H4Q96RI1 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC14.92□□□□□ -0.02
NR1H4Q96RI1 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NR1H4Q96RI1 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.92□□□□□ -0.02
NR1H4Q96RI1 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
NR1H4Q96RI1 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.92□□□□□ -0.02
NR1H4Q96RI1 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NR1H4Q96RI1 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC14.92□□□□□ -0.02
NR1H4Q96RI1 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
NR1H4Q96RI1 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NR1H4Q96RI1 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NR1H4Q96RI1 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NR1H4Q96RI1 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC14.92□□□□□ -0.02
NR1H4Q96RI1 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NR1H4Q96RI1 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NR1H4Q96RI1 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NR1H4Q96RI1 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
NR1H4Q96RI1 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC14.92□□□□□ -0.02
NR1H4Q96RI1 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
NR1H4Q96RI1 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NR1H4Q96RI1 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.92□□□□□ -0.02
NR1H4Q96RI1 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NR1H4Q96RI1 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NR1H4Q96RI1 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NR1H4Q96RI1 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC14.91□□□□□ -0.02
NR1H4Q96RI1 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
NR1H4Q96RI1 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NR1H4Q96RI1 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
NR1H4Q96RI1 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NR1H4Q96RI1 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC14.91□□□□□ -0.02
NR1H4Q96RI1 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
NR1H4Q96RI1 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
NR1H4Q96RI1 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NR1H4Q96RI1 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
NR1H4Q96RI1 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC14.91□□□□□ -0.02
NR1H4Q96RI1 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NR1H4Q96RI1 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NR1H4Q96RI1 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NR1H4Q96RI1 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NR1H4Q96RI1 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC14.91□□□□□ -0.02
NR1H4Q96RI1 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC14.91□□□□□ -0.02
NR1H4Q96RI1 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC14.91□□□□□ -0.02
NR1H4Q96RI1 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.91□□□□□ -0.02
NR1H4Q96RI1 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC14.91□□□□□ -0.02
NR1H4Q96RI1 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC14.91□□□□□ -0.02
NR1H4Q96RI1 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NR1H4Q96RI1 AL390719.2-201ENST00000606993 987 ntBASIC14.91□□□□□ -0.02
NR1H4Q96RI1 DFFB-212ENST00000625756 649 ntTSL 5 BASIC14.91□□□□□ -0.02
NR1H4Q96RI1 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
NR1H4Q96RI1 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NR1H4Q96RI1 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
NR1H4Q96RI1 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
NR1H4Q96RI1 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
NR1H4Q96RI1 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NR1H4Q96RI1 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NR1H4Q96RI1 MST1P2-201ENST00000457982 2291 ntBASIC14.91□□□□□ -0.02
NR1H4Q96RI1 AC079776.2-201ENST00000641154 1609 ntBASIC14.91□□□□□ -0.02
NR1H4Q96RI1 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NR1H4Q96RI1 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NR1H4Q96RI1 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
NR1H4Q96RI1 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC14.91□□□□□ -0.02
NR1H4Q96RI1 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC14.91□□□□□ -0.02
NR1H4Q96RI1 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.91□□□□□ -0.02
NR1H4Q96RI1 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NR1H4Q96RI1 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
NR1H4Q96RI1 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC14.91□□□□□ -0.02
NR1H4Q96RI1 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC14.91□□□□□ -0.02
NR1H4Q96RI1 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NR1H4Q96RI1 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NR1H4Q96RI1 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.9□□□□□ -0.02
NR1H4Q96RI1 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC14.9□□□□□ -0.02
NR1H4Q96RI1 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC14.9□□□□□ -0.02
NR1H4Q96RI1 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC14.9□□□□□ -0.02
NR1H4Q96RI1 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NR1H4Q96RI1 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC14.9□□□□□ -0.02
NR1H4Q96RI1 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NR1H4Q96RI1 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
NR1H4Q96RI1 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC14.9□□□□□ -0.02
NR1H4Q96RI1 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NR1H4Q96RI1 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
NR1H4Q96RI1 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
NR1H4Q96RI1 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
NR1H4Q96RI1 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
NR1H4Q96RI1 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.9□□□□□ -0.02
NR1H4Q96RI1 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.9□□□□□ -0.02
NR1H4Q96RI1 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.9□□□□□ -0.02
NR1H4Q96RI1 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.9□□□□□ -0.02
NR1H4Q96RI1 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NR1H4Q96RI1 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NR1H4Q96RI1 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
NR1H4Q96RI1 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NR1H4Q96RI1 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NR1H4Q96RI1 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NR1H4Q96RI1 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC14.9□□□□□ -0.02
NR1H4Q96RI1 AC104076.2-201ENST00000448912 469 ntBASIC14.9□□□□□ -0.02
NR1H4Q96RI1 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms